Pseudomonas protegens CHA0: PFLCHA0_c16720
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Entry
PFLCHA0_c16720 CDS
T02671
Symbol
ntrC
Name
(GenBank) nitrogen assimilation regulatory protein NtrC
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02020
Two-component system
pprc02025
Biofilm formation - Pseudomonas aeruginosa
pprc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLCHA0_c16720 (ntrC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
PFLCHA0_c16720 (ntrC)
02025 Biofilm formation - Pseudomonas aeruginosa
PFLCHA0_c16720 (ntrC)
09142 Cell motility
02040 Flagellar assembly
PFLCHA0_c16720 (ntrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprc03000
]
PFLCHA0_c16720 (ntrC)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pprc02035
]
PFLCHA0_c16720 (ntrC)
Transcription factors [BR:
pprc03000
]
Prokaryotic type
Helix-turn-helix
Other families
PFLCHA0_c16720 (ntrC)
Bacterial motility proteins [BR:
pprc02035
]
Flagellar system
Flagellar assembly proteins
Others
PFLCHA0_c16720 (ntrC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
AAA
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
AGL83460
UniProt:
A0A2C9EII3
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All DBs
Position
1856798..1858273
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVGSLSSSREVICVLIGTV
NAPGALLGLLKTLSTWDEFLPVLLMGENSSIDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQGVDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDLEERVAINGHAPD
FAATAMLPPEGLDLKDYLGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgatcgatgacgatagcgtgcgccgccgcgacctg
gcggtgattttaaattttcttggcgaagaaaatttaccctgcggtagccatgactggcag
caggctgtcggctctttgtcgtcaagtcgcgaagtaatttgcgtcctcatcgggaccgta
aatgctcctggtgcacttctgggcctgttaaagacactctcaacctgggatgagttcctt
ccagtgctgttgatgggcgaaaattcttccattgatctgcctgaagaccagcgtcgtcgt
gtgctttccaccctggaaatgcctcccagctacagcaaattgctggactccctgcaccgg
gcccaggtctatcgtgaaatgtacgatcaggcccgtgagcgcggtcgtcaccgtgaaccc
aatcttttccgcagcctggtaggcaccagtcgcgccatccagcatgtgcggcagatgatg
cagcaggtggcggataccgacgccagtgtgctgatccttggcgagtcgggaacaggcaag
gaagtggtagcgcgcaacctgcactatcactccaagcggcgcgacgcgcctttcgtaccg
gtcaattgcggcgccattccggcagagctgctggaaagtgagctgtttggccatgaaaag
ggcgcgttcaccggtgctatcaccagtcgtgccggacgtttcgagctggctaatggcggc
actctgttcctcgacgaaatcggcgatatgccactgccgatgcaggtcaagttgttgcgg
gtgctgcaggagcgcacgttcgagcgcgtgggcagcaacaagacccagggtgttgatgtg
cgaatcatcgctgccacccataagaatctggaaagcatgatcgaggtaggcagcttccgt
gaggatctgtactaccgcctcaacgtgttccccattgaaatggcgccgctgcgtgagcga
gtggaagacattccgctgctgatgaatgagctgatttcgcgaatggagcacgagaagcgc
ggttctatccgcttcaactctgccgccatcatgtcgctgtgccggcatggctggccgggt
aacgttcgtgagctggccaacctggtggaacgcatggcgatcatgcatccctatggtgtg
attggcgtcgtcgagttgccgaagaagttccgctatgtggatgacgaagacgagcagttg
gtggacagcctgcgcagcgatctggaagagcgcgtagcgatcaacggtcacgcgccagac
ttcgccgccacggccatgctgccgccggaaggcctggacctgaaggactacctcggcagc
ctggagcaagggctgatccagcaggcgctggacgacgccaatggcatcgtggcgcgggct
gcagagcgtttgcgcatccgtcgcaccaccctggtggagaagatgcgcaagtacggtatg
agccgtcgtgagggtgatgaacaggcggatgattga
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