Pseudomonas protegens CHA0: PFLCHA0_c18250
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Entry
PFLCHA0_c18250 CDS
T02671
Symbol
rluC
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprc03009
]
PFLCHA0_c18250 (rluC)
Enzymes [BR:
pprc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
PFLCHA0_c18250 (rluC)
Ribosome biogenesis [BR:
pprc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PFLCHA0_c18250 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RedAm-like_C
RluD_N
Motif
Other DBs
NCBI-ProteinID:
AGL83607
UniProt:
A0A2C9EIY5
LinkDB
All DBs
Position
2013411..2014367
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AA seq
318 aa
AA seq
DB search
MTTTAPSTPGVQLLEVSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPE
YKLQAGDVVRVPPVRVPERDEPVPLAQGLLQRLEASIVFEDKALIVINKPAGIAVHGGSG
LNFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYMA
LVRGHWATAVKQVRAPLLKSNLRSGERMVEVNEEGKEALTVFKVLRRFGDFATMVEAKPV
TGRTHQIRVHTLHAGHCIAGDSKYGDDDFTREIRELGGKRLFLHAYMLTVPLPDGGELKL
QAPVDEMWAKTVERLSAP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgactactgccccctcgactccaggcgttcaattgcttgaggtctcgccggaatat
gccggccaacgtattgataacttccttctcgcccggctcaaaggcgtgcccaagaccttg
atttaccgcattttgcgtaaaggcgaagtgcgagtgaacaaggggcggatcaagcccgag
tacaagctgcaagcgggtgatgtggtgcgcgtgcctcccgtgcgtgtgcccgagcgcgac
gagccggtgccgctggctcaagggctgctgcagcgcctggaagcctcgatcgtcttcgaa
gacaaggccctgattgtgatcaacaagcctgccgggattgccgtgcatggcggcagcggc
ttgaatttcggggtgatcgaagcctttcgtcagttgcgcccggacgccaaggagctggag
ctggtgcatcgcctcgatcgggacacctccggcctgctgatgatcgcgaaaaaacgcagc
atgctgcgtcatctgcatgccgcgctgcggggcgatggcgtggacaagcgctacatggcg
ctggtccgtggccattgggccacggcggtgaagcaggtgcgtgcgccgctgctcaagagc
aacctgcgctccggcgagcgcatggtggaggtcaacgaagagggcaaggaggccttgacc
gtgttcaaggtgctgcgccgcttcggtgatttcgccaccatggtcgaggccaagccggtg
accgggcgtacccaccagattcgtgtgcacaccctgcatgccgggcactgcattgccggt
gacagcaagtacggcgatgacgatttcactcgcgagatccgtgagctgggcggcaagcgc
ctgtttctccatgcctatatgttgacggtgccgctgcccgatggcggcgagctgaaattg
caggccccggtggatgagatgtgggccaagaccgtggagcgcctgagtgcaccctga
DBGET
integrated database retrieval system
