Pseudomonas protegens CHA0: PFLCHA0_c19440
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Entry
PFLCHA0_c19440 CDS
T02671
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc03030
DNA replication
pprc03430
Mismatch repair
pprc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFLCHA0_c19440 (dnaX)
03430 Mismatch repair
PFLCHA0_c19440 (dnaX)
03440 Homologous recombination
PFLCHA0_c19440 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprc03032
]
PFLCHA0_c19440 (dnaX)
03400 DNA repair and recombination proteins [BR:
pprc03400
]
PFLCHA0_c19440 (dnaX)
Enzymes [BR:
pprc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFLCHA0_c19440 (dnaX)
DNA replication proteins [BR:
pprc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFLCHA0_c19440 (dnaX)
DNA repair and recombination proteins [BR:
pprc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFLCHA0_c19440 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
PIF1
ResIII
AAA_16
AAA_14
AAA_18
TIP49
AAA_30
AAA_19
AAA_2
TsaE
nSTAND3
AAA_7
HasA
Rad17
Mg_chelatase
SKI
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AGL83726
UniProt:
A0A2C9EJ93
LinkDB
All DBs
Position
2148478..2150832
Genome browser
AA seq
784 aa
AA seq
DB search
MPSVGWSPSTSMAGMVQLSAMAKRRGGSAASRLALKRNRAHQVKRIQSPGCRRASNPLQN
ASLDRLDERAGCNFALAPLALPASAFQLRRFSMSYQVLARKWRPRSFREMVGQTHVLKAL
INALDSQRLHHAYLFTGTRGVGKTTIARIIAKCLNCETGITSTPCGTCSVCCEIDEGRFV
DLIEIDAASRTKVEDTRELLDNVQYAPSRGRFKVYLIDEVHMLSSHSFNALLKTLEEPPP
YVKFILATTDPQKLPATILSRCLQFSLKNMTPERVVEHLSHVLGVENVPFEDDALWLLGR
AADGSMRDAMSLTDQAIAFGEGKVMAADVRAMLGTLDHGQVYDVLHALINGDAKALLEAV
RHLAEQGPDWNGVLSEILNVLHRVAIAQALPEGVDNGHGDRDRVLALAQALPAEDVQFYY
QMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRPADTADAPRQPLKPVGISQATVDSAQAVA
APAPAVPVATVAPAPVVSAPVAPAPVAAPEPVAPPVAEAVAVEPEPVVAETVVDLPWNDP
VEPQIEQQPAVEPVLEVAAEQPELTPMPTPTPDSVVPDAPEWVSAPVPEPTVAEVDAATP
GIDLDDEPPLDEDYIEPDMDSAYSYLDELASEHAADPAPEPEPEPAAKPATGLALEWLQL
FPKLPISGMTGSIAANCTLMAVDGDHWLLHLDPAHSALFNATQQRRLNDALNQYHGRTLT
LAIELIKPEQETPAQAASRRRADRQREAEESIHGDPFIQRMVQEFGAVVRHDTIEPVEAL
AAQG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgccatcggtgggctggtcgccttcgacctcgatggccggcatggtccaactgtcggcg
atggcaaagcgcaggggcggctctgcggcttccaggctggcgctgaagagaaacagggcg
caccaggtcaaacgcatacagtctccagggtgtcggcgggcgagcaatcctttgcaaaat
gcaagcttagacagattagacgagcgcgccggatgcaatttcgcccttgctccgctagca
ttaccggcttccgctttccagttgcgacggttttcgatgagttatcaggttcttgcacgt
aaatggcgtccgcgctcgttccgcgaaatggtcggccagacccatgtgctcaaggctctg
atcaatgccttggacagccagcggctgcaccacgcctacctgtttaccggcactcgcggg
gtgggcaagaccaccatcgcgcgaatcattgccaaatgcctgaactgtgaaacaggtatc
acttccacgccctgtggcacctgttcggtgtgctgcgagatcgatgaggggcgctttgtc
gacctgatcgagatcgacgccgcgagccggaccaaggtcgaggatacccgtgaattgctg
gataacgtgcaatacgcaccgagccgcgggcgcttcaaggtctacctgatcgacgaagtg
cacatgctctccagccactcgttcaacgccctgctcaagaccctcgaagagccgccgccc
tacgtcaagttcatcctggcgaccactgatccgcagaagctgccggcgaccatcctctcg
cgctgcttgcagttctccctgaagaacatgaccccggaacgggtggtggagcacttgagc
cacgtcctgggcgtggagaacgtgccgttcgaggatgacgccctgtggctgctgggccgc
gccgccgatggctcgatgcgcgatgccatgagcctcaccgaccaggcgattgccttcggt
gaaggcaaggtcatggcggccgatgtgcgggccatgctcggcaccctcgatcacggccag
gtctatgacgtgctgcatgcgctgatcaacggcgacgccaaggcgttgctcgaggcggtg
cggcatttggcggagcaggggccggactggaacggcgtgctttcggaaattctcaacgtg
ctgcaccgggtggcgattgcccaggcattgccggaaggggtcgacaacgggcacggcgat
cgtgaccgggtgctggccctggcccaggccctgcctgccgaagacgtgcagttctattac
cagatgggcctgatcggtcggcgcgacctgccgttggcgccggacccgcgcggcggcttt
gaaatggtcctgctgcgaatgctggccttccgcccagccgataccgcggatgcaccgaga
cagccgctaaagccagtggggatcagccaggccacagttgattccgcccaagccgtggcg
gcgccggcacctgccgtgcctgtagcgaccgttgccccggctccggttgtgagtgctcca
gtggcgccagcacctgttgccgcgcccgaacctgtcgcgccccctgtggccgaagcggtc
gctgtcgaacccgagccggtggttgccgaaacggtggtcgacctgccttggaacgatccg
gtggagccacagatcgaacagcagccagcggtcgagccggtgctggaggtggccgccgag
cagcctgagctgacgccgatgccgaccccgacgccggacagcgtggtgccggacgcgccg
gagtgggtcagcgccccggtgccggaacccacggtggcggaggtcgacgccgccactccg
ggtatcgacctggacgacgagccgccgctggacgaggactatatcgagccggacatggat
tcggcctacagctacctggacgaactggccagtgagcacgcagccgatccggcaccggaa
cccgagcccgaacctgctgccaagccggccactggcctggccctggaatggctgcagctg
ttcccgaaactgccgatctcgggcatgaccggcagcatcgccgccaactgtaccctgatg
gccgtggacggcgaccattggctgctgcacctggacccggcccacagcgcactgttcaac
gccacccagcagcgtcgcctcaacgacgccctgaaccagtaccacgggcgtaccctgacc
ctggcgatcgagctgatcaagcccgagcaggaaaccccggcccaggctgcatcacggcgc
cgtgccgatcgtcagcgcgaggccgaggagtcgatccatggtgatccgttcatccagcgg
atggtccaggagttcggtgcagtggtgcgccacgatactattgaacctgtcgaggccctg
gcggctcagggctga
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