Pseudomonas protegens CHA0: PFLCHA0_c19940
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Entry
PFLCHA0_c19940 CDS
T02671
Symbol
fadB3
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00071
Fatty acid degradation
pprc00280
Valine, leucine and isoleucine degradation
pprc00310
Lysine degradation
pprc00362
Benzoate degradation
pprc00380
Tryptophan metabolism
pprc00410
beta-Alanine metabolism
pprc00640
Propanoate metabolism
pprc00650
Butanoate metabolism
pprc00907
Pinene, camphor and geraniol degradation
pprc00930
Caprolactam degradation
pprc01100
Metabolic pathways
pprc01110
Biosynthesis of secondary metabolites
pprc01120
Microbial metabolism in diverse environments
pprc01200
Carbon metabolism
pprc01212
Fatty acid metabolism
Module
pprc_M00087
beta-Oxidation
pprc_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PFLCHA0_c19940 (fadB3)
00650 Butanoate metabolism
PFLCHA0_c19940 (fadB3)
09103 Lipid metabolism
00071 Fatty acid degradation
PFLCHA0_c19940 (fadB3)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PFLCHA0_c19940 (fadB3)
00310 Lysine degradation
PFLCHA0_c19940 (fadB3)
00380 Tryptophan metabolism
PFLCHA0_c19940 (fadB3)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PFLCHA0_c19940 (fadB3)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PFLCHA0_c19940 (fadB3)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PFLCHA0_c19940 (fadB3)
00930 Caprolactam degradation
PFLCHA0_c19940 (fadB3)
Enzymes [BR:
pprc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PFLCHA0_c19940 (fadB3)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PFLCHA0_c19940 (fadB3)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PFLCHA0_c19940 (fadB3)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PFLCHA0_c19940 (fadB3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF6383
Motif
Other DBs
NCBI-ProteinID:
AGL83775
UniProt:
A0A2C9EJH6
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All DBs
Position
2212493..2214640
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AA seq
715 aa
AA seq
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MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMAASAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPDKLKDAALALVKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQIVLAEVEGQVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaattg
cgtcaggctgttgacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagtttgtcgacaacttcaagctg
ccggatgccgagctggtggcaggcaacctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgtgccaaccgttgccgcgatcaacggcatcgccctgggcggcggcctggaa
atgtgcctggcggcggactaccgcgtcatggctgccagtgccaagatcggcctgccggaa
gtcaagctgggcatctacccgggcttcggcggtaccgtgcgcctgccgcgtctgatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtgctgaagacgcgctg
aaagtcggtgccgtcgacgccgtggttgctcccgacaaactcaaggacgccgctctggcg
ctggtcaagcgcgccatttccggcgagttcgactacaaggccaagcgccagcctaagctg
gaaaagctcaagctcaacgccattgagcagatgatggctttcgaaaccgccaaaggtttc
gtggccggccaggctggcccgaactacccggcaccggtcgaagcgatcaagaccattcag
aaagccgccaactttggccgcgacaaagccttggaagtagaggccgccggcttcgtcaaa
ctggccaagacctctgctgcgcaaagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggccgccgtactc
ggcgccggtatcatgggtggcggcatcgcctaccagtcggcctccaaaggcacgccgatc
ctgatgaaggacatcaacgaacacggcatcgagcagggtctggcggaagccgcgaaactg
ctggtgggccgcgttgacaaaggccgcatgaccgccgcgaagatggctgaagtgctcaac
ggcattcgtccgaccctgtcctacggtgacttcggcaacgtcgacctggtggttgaagcc
gtggtcgagaaccccaaggtcaagcagatcgtgctggctgaagtggaaggccaggtcaag
gaggacaccatcctggcgtccaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaactggcggtagcgaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaagatcatggagaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgtgacgtcatggccgaaggcttc
ccggatcgcatgaaggacgatcgccgctcggccgtggacgtgctctacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgaaaccgacaagaagggcaagcag
aagaaggtggccgatccgtcggtgctggaagtgctcaagccgattgtctacgagcagcgt
gaagtcaccgacgaagacatcatcaactggatgatgatcccgttgtgcctggaaaccgtt
cgttgcctggaagacggcatcgttgaaaccgctgccgaagctgacatgggcctggtctac
ggcattggtttccctccattccgtggcggtgcgctgcgctacatcgattccatcggtgtt
gccgagttcgttgccctggccgaccagtacgccgatctgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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