Pseudomonas protegens CHA0: PFLCHA0_c25110
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Entry
PFLCHA0_c25110 CDS
T02671
Symbol
ygdH
Name
(GenBank) LOG family protein YgdH
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00230
Purine metabolism
pprc00240
Pyrimidine metabolism
pprc01100
Metabolic pathways
pprc01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PFLCHA0_c25110 (ygdH)
00240 Pyrimidine metabolism
PFLCHA0_c25110 (ygdH)
Enzymes [BR:
pprc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
PFLCHA0_c25110 (ygdH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Motif
Other DBs
NCBI-ProteinID:
AGL84282
UniProt:
A0A2C9EKU5
LinkDB
All DBs
Position
complement(2760179..2761552)
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AA seq
457 aa
AA seq
DB search
MPQRQVINASVSPKGSLETLSQREVQQLSAAGSGSIYTLFRQCALAILNTGAHVDNAKTI
LDAYHDFEVRIHQQDRGVRLELLNAPADAFVDGEMIASTREMLFSALRDIVYTENELDSQ
RIDLDSSQGITDYVFHLLRNARTLRPGVEPKMVVCWGGHSINTEEYKYTKKVGHELGLRK
LDICTGCGPGVMKGPMKGATIAHAKQRMSGGRYLGLTEPGIIAAEAPNPIVNELVILPDI
EKRLEAFVRVGHGIIIFPGGAGTAEEFLYLLGILMHPDNRDLPFPVILTGPKSAAPYLEQ
LNAFVLATLGEAARQHYQIIIDNPPEVARQMTEGLKTVKQFRRERNDAFHFNWLLKIDES
LQRPFDPTHENMANLQLSHALAPHELAANLRRAFSGIVAGNVKDQGIRLIEQKGPYSIHG
DPAIMQPLDQLLKAFVEQHRMKLPGGAAYVPCYRVVN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaagacaagtgatcaatgcttcggtgagcccgaaaggcagcctggagaccctc
tcgcaacgtgaagtgcaacagctcagcgccgccggttccggcagcatctataccctgttc
cgccagtgcgccctggccatcctcaatactggcgcccacgtcgacaacgccaagaccatc
ctcgacgcctaccacgatttcgaagtgcgcattcaccagcaggatcgcggcgtgcgcctg
gaactgctgaacgcaccggccgatgccttcgttgatggcgagatgatcgccagcacccgg
gaaatgctcttcagcgccctgcgcgacatcgtctacaccgagaacgaactggacagccag
cgcattgacctggacagctcccagggcatcaccgactacgtcttccacctgctgcgcaac
gcccgcaccctgcgccccggcgtggagcccaagatggtggtgtgctggggcggccactcg
atcaataccgaagaatacaaatacaccaagaaggtcggccacgaactgggcctgcgcaag
ctggacatctgcaccggctgcggcccgggcgtgatgaagggcccgatgaagggcgccacc
atcgcccacgccaaacagcgcatgagcggcggccgctacctgggcctgaccgagccgggg
atcatcgccgccgaagcaccgaaccccatcgtcaacgagctggtgatcctgccggacatc
gagaagcgcctggaagccttcgtccgcgtcggccacggcatcatcatcttccccggcggc
gccggcaccgcggaggagttcctctacctgctgggcatcctgatgcacccggacaaccgc
gacctgcccttcccggtgatcctcaccggccccaagagcgcggcgccctacctggagcag
ctcaacgccttcgtcctggcaaccctgggcgaagcggcgcgccagcactaccagatcatc
atcgacaacccgccggaagtggcgcggcagatgaccgaggggctcaagaccgtcaagcag
ttccgccgcgagcgcaacgacgccttccacttcaactggctgctgaagatcgacgagagc
ctgcaacgtcccttcgatccgacccacgagaacatggccaacctgcaactgagccatgcc
ctggcgccccacgaactggcggccaacctgcgtcgtgcgttctccggcatcgtcgccggc
aacgtcaaggaccagggcatccgcctgatcgagcagaaaggcccgtacagcatccacggc
gacccggcgatcatgcagccccttgaccagctgctcaaagccttcgtcgagcagcaccgc
atgaagctgcccggcggcgccgcctacgtaccgtgctaccgcgtggtcaactga
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