Pseudomonas protegens CHA0: PFLCHA0_c25910
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Entry
PFLCHA0_c25910 CDS
T02671
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFLCHA0_c25910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprc03400
]
PFLCHA0_c25910
Enzymes [BR:
pprc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PFLCHA0_c25910
DNA repair and recombination proteins [BR:
pprc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFLCHA0_c25910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
Motif
Other DBs
NCBI-ProteinID:
AGL84362
UniProt:
A0A2C9EL29
LinkDB
All DBs
Position
2840576..2841469
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AA seq
297 aa
AA seq
DB search
MISLDCDDLFDTWRQQARWLLSHSIDPSRVSWSGTQEADLFASDEACPEQPGPFRARIPL
ALLELLERAACYRGEQRWSLLYEVLWRVSHGDRTAMLSGDQLGSELQRRIKQVGREAHHL
HAFVRFVSLPAGRSQLAEQPEYVAWHEPAHDILAQASRHFIGRMGRHRWMIATPRDGVYF
DGTQLHHHRRCPSAWRQLAQAGEDPGGELWLAYYSHIFNPARLNPRVMQGHLPARFWKHL
PEGPLIPALINQARHGKQRDGQASQVAARPGKRIGQPRGDSAGQAPGPSLTMGGFEQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcctggactgtgacgacctgttcgacacctggcgccagcaggcgcgctggctg
ctcagccattccatcgacccgagccgggtcagttggtccgggacgcaggaggccgatctg
ttcgccagcgatgaggcttgccctgagcagcccggtccgtttcgtgcgcggattcccctg
gccctgctggagctgctggaacgggccgcctgctatcgcggcgagcagcgctggagcctg
ttgtacgaggtgctgtggcgggtcagccatggcgaccgcacggccatgctcagcggcgat
caactgggcagcgagttgcagcggcgaatcaagcaagtcggccgcgaggcccatcacctg
catgccttcgtgcgcttcgtcagcttgcccgcgggccgctcacagctggccgagcagcct
gaatacgtggcctggcacgagccggcccacgacatcctggcccaggccagccggcatttc
atcgggcgcatggggcgccaccgctggatgatcgccacgccccgggacggggtgtatttc
gacggtacgcaactgcaccaccacaggcgctgccccagcgcctggcggcaactggcccag
gccggtgaagaccccgggggcgagctgtggctggcctactacagccatatcttcaacccg
gcgcggctcaacccccgggtgatgcaggggcatttgccggcgcgcttctggaagcacctg
ccggaggggccgctgattccggcactgatcaaccaggctcgccacggcaagcagcgcgac
ggccaggccagccaggtggcagcacggccaggcaagcggatcggccagccgcgcggcgat
agcgctgggcaggccccagggccttccctgacaatgggcggctttgaacaatga
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