Pseudomonas protegens CHA0: PFLCHA0_c27910
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Entry
PFLCHA0_c27910 CDS
T02671
Symbol
sbcD
Name
(GenBank) nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprc03400
]
PFLCHA0_c27910 (sbcD)
DNA repair and recombination proteins [BR:
pprc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFLCHA0_c27910 (sbcD)
Archaeal homologous recombinant proteins
PFLCHA0_c27910 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Flavi_M
Motif
Other DBs
NCBI-ProteinID:
AGL84562
UniProt:
A0A2C9ELM8
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All DBs
Position
complement(3060632..3061963)
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AA seq
443 aa
AA seq
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MNTHLPVNSLPFRRGHPYVRPSLLHAEPALRLFHTSDWHLGQNLHGQERDFEHACFLEWL
LRQLKHEQPDVLLIAGDIFDTVNPPVSAQERLYDFIVSAHEQQPALTVVMIAGNHDSGSR
IELPAPLMRRLRTHALGRVLWLDDGQLDAERLLLPLPDAGGQVAAWCLALPFLRPAEVTG
RQLGDDYLKGIAQVHEWLIAAANAKRQPGQALVAVSHAHMAGGSVSEDSERSLIIGNAEA
LPASLFGPDISYVALGHLHKPQKVNGEERIRYSGSPIPLSFSEIGYQHQILDVRLDGETL
VSVEPRLIPRAVNLQRLGPAPLGELLTQLGELPDIDLLAEEQRQPWLEVRVRLDEPQPDL
RQQVESALQGKAVRLVRIAAEYAGKGAGDGEEASAELIELDQLTPEELFRRAWRDAYANE
VDEATLKDFALLLQDVQQEGEQP
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcatttgccagtaaactctctgccctttcgccgcggtcacccttatgtgcgg
ccaagccttttgcatgcggagcctgccttgcgtctgtttcacacctccgactggcacctg
ggccagaacctccacggccaggaacgcgacttcgaacacgcctgtttcctggagtggctg
ctgcgccagctcaagcacgaacagcccgatgtgctgctgatcgccggcgatatcttcgac
accgtcaacccgccggtcagcgcccaggagcggctctacgacttcatcgtcagcgcccac
gagcagcagccggccctgaccgtcgtgatgatcgccggcaatcacgactccggctcgcgc
atcgagctgccggcgcccttgatgcgccgcctgcgcacccacgccctgggccgggtgctg
tggctggacgacggccagttggacgccgagcgcctgctgctaccgctgcccgacgccggc
ggccaggtcgccgcctggtgcctggccctgccgttcctgcggccggcggaagtcaccggc
cgccagctgggcgacgactacctcaagggcattgcccaggtccacgaatggctgatcgcc
gcggccaacgccaagcgccagccgggccaggccctggtcgccgtcagccatgcgcacatg
gccggcggttcggtctcggaagattccgaacgcagcctgatcatcggcaacgccgaggcc
ctgcccgccagtctgttcggcccggacatcagctacgtggccctgggccacctgcacaag
ccgcagaaggtcaacggcgaggagcgcatccgctacagcggctcgccgatcccgctgtcg
ttttccgagatcggctatcagcaccagatcctcgacgtgcgcctggacggcgagaccctg
gtcagcgtcgaaccgcggctgattccccgcgcggtgaacctgcaacgcctgggcccggcg
cccctgggggaactcctgacccagctcggcgagctgccggacatcgacctcttggccgaa
gaacagcgccagccctggctggaagtgcgggtgcgcctggacgagccccagccggacctg
cgccagcaagtggaaagcgccctgcaaggcaaggccgtgcgcctggtgcggatcgccgcc
gaatacgccggcaagggcgcaggtgacggtgaagaggccagtgccgagctgatcgagctg
gaccagctgacccccgaagaactgttccgccgcgcctggcgcgacgcttacgccaacgag
gtggacgaagccaccctcaaggatttcgccctgctgttgcaggacgtccagcaagaaggt
gaacagccatga
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