Pseudomonas protegens CHA0: PFLCHA0_c30550
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Entry
PFLCHA0_c30550 CDS
T02671
Symbol
lcfA2
Name
(GenBank) long-chain-fatty-acid--CoA ligase LcfA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00061
Fatty acid biosynthesis
pprc00071
Fatty acid degradation
pprc01100
Metabolic pathways
pprc01212
Fatty acid metabolism
pprc02024
Quorum sensing
pprc04146
Peroxisome
Module
pprc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PFLCHA0_c30550 (lcfA2)
00071 Fatty acid degradation
PFLCHA0_c30550 (lcfA2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFLCHA0_c30550 (lcfA2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFLCHA0_c30550 (lcfA2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pprc01004
]
PFLCHA0_c30550 (lcfA2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprc04147
]
PFLCHA0_c30550 (lcfA2)
Enzymes [BR:
pprc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PFLCHA0_c30550 (lcfA2)
Lipid biosynthesis proteins [BR:
pprc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PFLCHA0_c30550 (lcfA2)
Exosome [BR:
pprc04147
]
Exosomal proteins
Exosomal proteins of breast milk
PFLCHA0_c30550 (lcfA2)
Exosomal proteins of breast cancer cells
PFLCHA0_c30550 (lcfA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AGL84825
UniProt:
A0A2C9EMF5
LinkDB
All DBs
Position
3406624..3408315
Genome browser
AA seq
563 aa
AA seq
DB search
MDLAAYQQHLHALQQAAWPEGAPRTPQYPLGQQPLTEYLRAWAQSQASAVALDFYGYQLS
FAELDRLSDRCAALLGELGIGPGDRVAVYLPNCPQLHIGFWGILKCGAVYAPVSPLARTL
ELEYQLKDSGARVILCFDQLLDVVQAVSDACELSAILATSLSELCPATPSIPLPDLLRAP
KRLAPGVIDFFPALEACRAATPAHRPALGDMAALNYTGGTTGMPKGCIHSHGDMLYTCAS
FVPVALGLRQDSVLLNFLPEFWIAGENAGLLFPIYAGCRLVLLARWDALGFMAAVAHYRV
SHCGLLVDSAAEVLEHPSVADYDLSSLKATGCISFVKKLTPDYRQRWRAQTGCTLFEFSF
GMTETHTCDTFTAGLQTDDFDLKSAPTFVGLPVPGTEFKVCDFDSGALLPLGSEGELCVR
SPSLLQGYWQRPEASAAALRDGWLHTGDLGQITGQGFIRYLGRRKEMLKVNGMSVFPSEL
EALFGQHPQVLASAVIGRADERRGQQPVAFVVLKPDAPQDPHALAAWCQEVMAAYKVPQI
RLVASLPMTATGKVKKNELEQQL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaccttgcggcctatcagcagcaccttcacgccctgcagcaggccgcctggcccgaa
ggcgcgccgcgtaccccgcagtaccccctgggccagcagccccttaccgaatacctgcgg
gcctgggcgcagtcgcaagccagtgccgtggccctggacttctatggctatcagttgagc
tttgccgagctggaccggctgtccgaccggtgcgccgccttgctcggcgagctgggaatc
ggccccggggaccgggtggcggtgtacctgcccaactgcccgcaattgcatatcggcttc
tggggcattctcaagtgcggcgccgtgtacgcgccggtcagccccctggcgcgcaccctg
gagctggagtatcagctcaaggacagcggcgcccgggtgatcctgtgcttcgaccaactg
ctggatgtggtgcaggcggtcagcgacgcctgcgagttgagcgcgatcctggccaccagc
ctcagcgagttgtgcccggccaccccgagcattcccctgccggacctgctgcgggcgccc
aagcgcctggctccgggggtgatcgactttttccccgccctggaggcctgtcgcgccgcc
accccggcccaccgtcctgccctgggcgatatggccgcactgaactacaccggtggcacc
accggcatgcccaagggctgcattcatagccacggcgacatgctctacacctgcgccagc
ttcgtgccggtggccttgggcctgaggcaggacagcgtgctgctcaatttccttcccgag
ttctggatcgccggggaaaacgccggcctgctgtttcccatctacgccggctgccgcctg
gtgctgctggcgcgctgggacgccttgggtttcatggcggcggtggcgcactaccgggtc
agccattgcgggctgctggtggacagcgccgccgaagtgctggagcacccaagcgtcgcc
gactacgacctgagctccctgaaggccaccggctgcatctctttcgtcaagaagctcacc
ccggactatcgccagcgctggcgcgcgcaaaccggctgcaccctgttcgagttcagcttc
ggcatgaccgaaacccacacctgcgacacctttaccgccggcctgcagaccgacgacttc
gacctcaaaagcgcgccaaccttcgtcggcctgccggtgccgggcaccgagttcaaggtc
tgcgacttcgacagcggcgccctgctgcccctgggctccgagggcgagttgtgcgtgcgc
agcccttccctgctgcagggttactggcagcgcccggaggcgtccgcggcggccctgcgc
gacggctggctgcacaccggtgacctggggcagatcaccggacaagggtttatccgctac
ctgggccggcgcaaggaaatgctcaaggtcaatggcatgagcgtgtttcccagcgagctg
gaggcgctgttcggccagcacccgcaggtgctggccagcgcagtgatcggccgcgccgat
gaacgtcggggccagcagccggtggccttcgttgtgctcaagcccgatgcgccccaggac
ccgcatgccctggcagcctggtgccaggaggtgatggccgcctacaaggtgccgcagatc
cgcctggtggccagcctgcccatgaccgccaccggcaaggtcaagaagaacgagctggaa
caacagctctga
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