Pseudomonas protegens CHA0: PFLCHA0_c33510
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Entry
PFLCHA0_c33510 CDS
T02671
Name
(GenBank) putative ribonuclease T2 family protein
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprc03016
]
PFLCHA0_c33510
Enzymes [BR:
pprc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
PFLCHA0_c33510
Transfer RNA biogenesis [BR:
pprc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PFLCHA0_c33510
Prokaryotic type
PFLCHA0_c33510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
S_4TM
Motif
Other DBs
NCBI-ProteinID:
AGL85121
UniProt:
A0A2C9END0
LinkDB
All DBs
Position
complement(3754545..3755228)
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AA seq
227 aa
AA seq
DB search
MRFPKEKVTMRKFFTLMAALVLTLGMVGISDARQPKQQRDSVAGTFDYYLLTLSWSPTFC
LMHPENEQCTGKGYGFVLHGLWPQYAKGGWPESCPPLTQLNAQERAKGLTLFPTAKLMNH
EWSKHGTCSGLGAMGYLDAADKALARVQIPEALQPSTTVRYFEASQIAQQFRQSNPGIAE
NGIAILCSGPELSEVRVCLTKDLEFGACGKGVKNQCRAGQIRIPPIR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttcccaaggagaaggtcacgatgagaaagttttttaccctgatggcagccctg
gtgctgaccctggggatggtgggcatcagcgacgcacgtcagcccaagcagcagcgcgat
tcggtggcgggtaccttcgactactacctgctgaccctgtcctggtcgccgaccttctgc
ctgatgcacccggaaaacgagcagtgcaccggcaagggctacggttttgtcctgcacggc
ctgtggccgcaatacgccaagggtggctggcccgagtcctgcccacccctgacccagctc
aatgcccaggagcgggccaagggcctgaccctgtttcccaccgccaagctgatgaaccat
gaatggagcaagcacggcacctgcagcggcctgggggccatggggtacctggatgccgcg
gacaaggccctggccagggtacagattcccgaggcgctgcagccttcgaccacggtgcgc
tatttcgaggccagccagattgcccagcagtttcgccagagcaacccggggatcgccgag
aacggcatcgccattctgtgcagcggccccgagctgtccgaggttcgtgtttgcctgacc
aaggacctggagttcggcgcctgcggcaaaggcgtgaagaaccagtgccgtgccgggcag
atccgcattccgcccatccgctga
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