Pseudomonas protegens CHA0: PFLCHA0_c35000
Help
Entry
PFLCHA0_c35000 CDS
T02671
Name
(GenBank) polyamine ABC transporter, periplasmic polyamine-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFLCHA0_c35000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprc02000
]
PFLCHA0_c35000
Transporters [BR:
pprc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PFLCHA0_c35000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AGL85268
UniProt:
A0A2C9EP18
LinkDB
All DBs
Position
complement(3901716..3902756)
Genome browser
AA seq
346 aa
AA seq
DB search
MSNTLRCGVALSWVLLCTGAYAQPQNLTVISFGGATKQAQEQAYFQPFNQSGAARVVAGE
YNGELSKIKAMVDVGKTSWDVVEVESPELLRGCDEGLFEPLDLARFGDPAQYVPGTLTEC
GVATYVWSMVMAFAPQKLAKAPQSWADFWNLKDFPGKRGLRKSAKYTLEIALLADGVAPA
QLYQVLNTPEGVTRAFAKLDQIKPYIQWWEAGAQPPQWLVAGDVVMSAAYNGRIAMAQKE
GMQLSILWPQSLYDPEYWAVVKGSPNKALAEAFILFASQPQAQKVFSENIPYGPVHRQAL
PLLPEAVQRQLPTFEANLKGARAVDAGFWVDHGEELEQRFNAWAAR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaccttgcgttgcggcgttgcgttgtcgtgggtcttgctgtgcaccggggct
tacgcccagccgcagaacctcacggtcatttcctttggcggagccaccaaacaggctcag
gagcaggcctacttccagccattcaaccagagcggggcggcccgggtagtggccggcgaa
tacaatggcgagctgtcgaagatcaaggccatggtcgatgtcggcaagaccagctgggat
gtggtcgaagtggagagcccggagctgctgcgtggctgtgacgagggcctgttcgaaccc
ttggacctggcccgtttcggggacccggcgcagtacgtgcccggcacgttgaccgaatgc
ggggtcgccacttatgtgtggtcgatggtcatggcctttgccccgcagaagctggcgaag
gcgccgcagtcctgggcggatttctggaacctcaaggacttccccggcaagcgcggcttg
cgcaagagcgccaagtacaccctggaaattgccttgctggccgacggtgtggcgcctgcc
cagttgtatcaggtgctcaacacccccgagggcgtgacccgggcttttgccaagctcgac
cagatcaagccctacatccagtggtgggaagccggggctcagccgccgcagtggctggtg
gccggtgacgtggtgatgagcgcagcctacaacgggcgcattgccatggcccagaaggag
ggcatgcagctgagtatcctctggccccagagcctgtacgacccggagtactgggcggtg
gtcaagggctcgccgaacaaggccctggccgaagccttcattctgttcgccagccagccc
caggcgcagaaagtgttctctgaaaacatcccctacgggccggtgcatcgtcaggcgctg
ccattgctacctgaggcggtgcagcggcaactgccgaccttcgaggccaatttgaagggc
gccagggcagtggacgcggggttctgggtcgatcatggcgaggagctggagcagcgtttc
aacgcctgggccgcccgctga
DBGET
integrated database retrieval system
