Pseudomonas protegens CHA0: PFLCHA0_c35250
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Entry
PFLCHA0_c35250 CDS
T02671
Symbol
fecI6
Name
(GenBank) putative RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFLCHA0_c35250 (fecI6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprc03021
]
PFLCHA0_c35250 (fecI6)
Transcription machinery [BR:
pprc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFLCHA0_c35250 (fecI6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
RELCH_C
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AGL85293
UniProt:
A0A2C9ENQ6
LinkDB
All DBs
Position
3933677..3934186
Genome browser
AA seq
169 aa
AA seq
DB search
MVPNPSLQHAVGELYLQHHNWVVQLLRRKLGNQDQAMDLAQDTFVRILRSERLPVLREPR
AYLNTVASRLCGQYFRRQALERAYLETLAQLEPQYQPSPETRLLVLEALDAVGQVLDGLG
SRVREVFLLSQLEGLTYPQIAQRLQLSVNVVQKAMLKAYRHCYAAVYPG
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccaacccttcgctacagcacgccgtgggcgagctctacctccagcatcacaac
tgggtggtgcaactgctgcgacgcaagctcggcaaccaggaccaggccatggacctggcg
caggacacctttgtgcgcatcttgcgcagcgagcgactgccggtactgcgcgaaccccgg
gcctacctcaacaccgtggccagccgcctgtgcgggcagtatttccggcgccaggccctg
gagcgcgcatacctggaaaccctggcgcagctggagccgcagtaccagccctcgccggaa
acccggctgctggtgcttgaggccctggacgccgtgggccaggtgctggacggcctgggc
agccgggtgcgcgaggtgtttctgctgtcccagctcgaaggcctgacctacccgcaaatt
gcccaacgcctgcagctctcggtcaacgtggtgcagaaagccatgctcaaggcctaccgc
cactgctacgcggcggtgtacccgggatga
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