Pseudomonas protegens CHA0: PFLCHA0_c39470
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Entry
PFLCHA0_c39470 CDS
T02671
Symbol
icd2
Name
(GenBank) isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00020
Citrate cycle (TCA cycle)
pprc00480
Glutathione metabolism
pprc00720
Other carbon fixation pathways
pprc01100
Metabolic pathways
pprc01110
Biosynthesis of secondary metabolites
pprc01120
Microbial metabolism in diverse environments
pprc01200
Carbon metabolism
pprc01210
2-Oxocarboxylic acid metabolism
pprc01230
Biosynthesis of amino acids
pprc04146
Peroxisome
Module
pprc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pprc_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PFLCHA0_c39470 (icd2)
09102 Energy metabolism
00720 Other carbon fixation pathways
PFLCHA0_c39470 (icd2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PFLCHA0_c39470 (icd2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFLCHA0_c39470 (icd2)
Enzymes [BR:
pprc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PFLCHA0_c39470 (icd2)
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Gene cluster
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Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AGL85713
UniProt:
A0A2C9EPX0
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All DBs
Position
4431004..4433310
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AA seq
768 aa
AA seq
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MTFERKRLPGAPRVSAHALAKKRVNPNMPTRSKIIYTFTDEAPALATYSLLPIVEAFTAS
ADIAVETRDISLAGRILASFPEQLGTKAVPDHLAELGELAVTPEANIIKLPNISASVPQL
QAAIKELQAQGYALPDYPETVTCDADKDAKARYDKVKGSAVNPVLREGNSDRRAPLSVKN
YARKHPHKMGAWAKDSKSHVAHMSNGDFYGSEKAALIEAADSVKIELIALDGTATVLKEK
TAVQAGEILDCAVMSKKALRAFIAAEIEDAKKQGVLLSVHLKATMMKVSDPIMFGQIVAE
FYQDALSKHAAVLQEIGFNLNNGIGDLYARIKTLPADQQAAIEADIQAVYAARPALAMVN
SDKGITNLHVPSDVIVDASMPAMIRDSGKMWGTDGQLHDTKAVIPDRCYATIYQAVIEDC
KANGAFDPTTMGSVPNVGLMAKKAEEYGSHDKTFEIKADGVVRVTDSKGSLLLEQKVEAG
DIFRMCQTKDAPIQDWVKLAVNRARASSTPAIFWLDPMRAHDGVMIEKVQAYLKDHDTSD
LDIRIMSPVEAMKFTLARTRDGKDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMN
GGGLFETGAGGSAPKHVQQLLEENFLRWDSLGEFLALAASLEHLGNTYNNPKALVLAKTL
DQATGQFLDNNKSPSRKVGNIDNRGSHFYLALYWAQALAAQTEDAALQAQFSTLAKTLTE
NEATIVAELNAVQGKPVDIGGYYSANPELVSQAMRPSATLNAAIAALV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgacctttgaacgaaagcgcttacccggcgcacctcgagtttctgcgcacgctttagca
aagaagagagttaatccgaatatgcccacccgctcgaagatcatctacaccttcaccgac
gaagccccggccctcgccacctattccctgctgcctatcgtagaagccttcaccgcttcg
gctgatatcgccgtggaaacccgcgacatctccctggccggccgcatcctcgccagcttc
cctgagcagttgggtaccaaagcggtgccggaccaccttgccgaactgggcgagctggcg
gtcaccccagaagccaacatcatcaagctgccgaacatcagcgcctcggtcccgcaactg
caagccgcgatcaaagagctgcaggcccagggctatgcgctgccggactacccagaaacc
gtgacctgcgacgccgacaaagacgccaaggcgcgttacgacaaggtcaagggcagcgcc
gtgaacccggtcctgcgtgaaggcaactccgaccgccgtgctccgctgtcggtgaagaac
tatgcgcgcaagcacccgcacaagatgggcgcctgggccaaggactccaagtcccacgtt
gcccacatgagcaacggcgacttctacggcagcgaaaaagcggccctgatcgaagcagcc
gacagcgtcaagatcgaactgatcgccctggacggcactgccaccgtcctgaaggaaaag
accgccgtgcaagccggcgagatcctcgactgcgcagtcatgagcaaaaaggccttgcgc
gccttcatcgccgctgaaatcgaagacgccaagaagcaaggcgtactgctctcggtacac
ctcaaggccaccatgatgaaggtctccgacccgatcatgttcggccagatcgttgccgag
ttctatcaggatgccctgagcaagcacgccgccgtgctgcaggaaatcggcttcaacctg
aataacggcatcggcgacctgtacgcccgcatcaagaccctgccagccgaccagcaagct
gcgatcgaagccgacatccaggccgtctacgcagcccgccctgccctggctatggtcaac
tccgacaaaggcatcaccaacctgcacgtgccgagcgacgtgatcgtcgacgcctcgatg
cctgccatgatccgtgactccggcaagatgtggggcaccgacggccagctgcacgacacc
aaggctgtgatcccggaccgttgctacgcaaccatctaccaggccgtgatcgaagactgc
aaagccaatggcgcgttcgatccgaccaccatgggcagcgtgccgaacgttggcctgatg
gcgaaaaaagccgaagaatacggttcccacgacaagactttcgaaatcaaggctgacggc
gtggttcgcgtcaccgacagcaaaggcagcctgctgctggagcagaaagtcgaagccggc
gacatcttccgcatgtgccagaccaaagacgcgccgatccaggactgggtcaaactggcg
gtcaaccgtgctcgtgccagcagcactccggccattttctggctggacccgatgcgtgcc
cacgacggcgtgatgatcgagaaagttcaggcctacctgaaggatcacgacaccagcgac
ctggacatccgcatcatgtccccggtcgaagccatgaagttcaccctggcccgcacccgc
gacggcaaggacaccatctcggtgaccggcaacgtactgcgcgactacctgaccgacctg
ttcccgatcatggaactgggcaccagcgccaagatgctgtcgatcgtgccgctgatgaac
ggcggcggcctgttcgaaaccggcgccggcggttcagccccgaagcacgtacagcagctg
ctggaagagaacttcctgcgctgggactccctgggtgagttcctggccctggccgcctcc
ctggagcacctgggcaacacctacaacaacccgaaagccctggtgctggccaagaccctg
gaccaggcgaccggccagttcctcgacaacaacaagtcgccatcgcgcaaggtcggcaac
atcgacaaccgcggcagccacttctacctggcgctgtactgggctcaagccctggccgcc
cagaccgaggacgccgccctgcaagcgcagttcagcaccctggccaagaccctgaccgag
aacgaagcgaccatcgtcgccgagctcaacgccgtacagggcaagcccgtggacatcgga
ggctactacagcgccaaccccgaactggtgagccaggccatgcgcccgagcgccaccctc
aacgcagccattgctgcgctggtgtaa
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