Pseudomonas protegens CHA0: PFLCHA0_c39840
Help
Entry
PFLCHA0_c39840 CDS
T02671
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprc02000
]
PFLCHA0_c39840
Transporters [BR:
pprc02000
]
Other transporters
Pores ion channels [TC:
1
]
PFLCHA0_c39840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AGL85750
UniProt:
A0A2C9EQ02
LinkDB
All DBs
Position
complement(4476099..4479776)
Genome browser
AA seq
1225 aa
AA seq
DB search
MKRGLKITLLAIVALVILIILAVASVLGTQAGSRWALARVPGLTLENFEGRLGGHWSADH
LLWQQEGNRVELNAVQFTWSPGCLLRMTLCIEQLEADQVSLLFPPSGETETSSEPISLPE
LKLPLAIELGQVRVGSLLFNGSEELKTLQLAAHWTAQGLQIDSLHLKRDDLSLDLSGLLQ
PSGDWPLTAQGNLGLPAPGGGPWSLALKVEGDLLKTLQLNADSRGYLQGQLSGQVQPLVE
NLPAQVRITADGFKASADLPDTLQLDQLELTGRGDLKSGYQLAGKASLPAEQGPVALLLQ
GKVDAKGAQIAALDLSANDKQHLKLSGQLDWSEGFAAEAKLAWLDFPWHRLYPLIDEPAV
RVRSFDAEVAYRDGNYLGNFKGDLDGPAGAFSLSSPFSGDLTKIYLPQFKLAAGQGKAEG
HLNLQFADGIAWDTALDLSAINPAYWVAELPGTLAGPLRSQGEMKNQQLKLNANLDLKGR
LRGQPAVLQAKADGADEQWTLGALDIRLGDNRINGSGSLQQKITGQLDIKMPRLGQLWPE
LRGQLNGRLDLAGTLKAPQGKLDLAGQQLAFAENRLQNLKLDATLDGAQKAQVDLKGSGI
QLGDTQLGTLTLAGQGDIKKQKLQLDLQGPLLKLALGLDGALDQGSWRGRLASGDVQTGG
QDWKLQNPARLERLANGTLNFGAHCWASGDASLCGEDQRLMPDPKLRYHLKRFPLDSLAQ
WLPKDFAWKGMLNADVQLDLPASGPQGQIMLDASGGTLRVKEKDQWLDFPYQALKLNTRL
TPRRIDTHLQFDGGKLGELMLQAQINPLPKSKPLSGDFRLSGLDLSVARPFVPMVEKLSG
SLNGSGRLSGGLLAPQVNGNVQLSGGEVSGSELPISLEDLQLSAQIAGESVQLNGGWKSG
KAGQGSLNGNIAWGRALLVDLSLKGTQLPVTVEPYAALEVAPDLKISLQEEKLAIAGKVL
IPKGQITVRELPPSTVKVSDDTVIVGQQTDDGKKPMAMAMNIDVEVGQDKLAFSGFGLTA
NLQGHVHIGDNMDTRGELWLNDGRYRAYGQRLTVRRARLLFAGPIDQPYLDIEAVRQTDD
VIAGIRLSGSAEQPATQIFSEPAMSQEQALSYLVLGRPLTSTGEDNNMLAQAALGLGLMG
SSELTGGIAKNLGIQDFQLDTQGSGNNTSVVASGAISERLSLRYGVGVFEPASTIALRYK
LSKKVYLEAASGFASSLDIFYKRDF
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcgtggtttgaagataacgctgctggcgattgttgcgctggtgatcctgatcatt
ctggccgtggccagcgtactcggaacccaggctggcagccgctgggccctggcgcgagtg
ccggggctgaccctggaaaatttcgagggccgccttggcgggcactggagcgccgatcat
ctgctctggcaacaggagggcaaccgggtcgagctcaatgccgtgcagttcacctggtcg
cccggctgcctgctgcgcatgaccctgtgcatcgagcagttggaagccgatcaggtcagc
ctgctgttccctccgagcggcgaaaccgaaaccagttcggagcccatcagcctgccggaa
ctgaagctgccgttggccatcgagttggggcaagtgcgtgtgggcagcctgctgttcaat
ggcagtgaagaactcaagaccctgcagctggcggcgcactggactgcccaaggcctgcag
atcgactctttgcacctaaagcgcgatgacctgagtctggacctttccgggctgctgcaa
cccagtggcgactggcccctgaccgcccaaggcaacctcggcttgcccgctcccggcggt
ggcccctggtccctggcgttgaaggttgaaggcgacctgctcaagactctgcagctcaat
gccgacagccgtggctacctgcaagggcaattgagcggccaggtgcagcccctggtggag
aacctgccagcccaggtgcgaatcactgccgatgggttcaaggccagcgccgatctgccg
gacaccctgcaactggatcagctggagctgactggcaggggcgacctgaaaagcggctac
cagctcgccggcaaggccagcctgccggcggagcagggcccggtggccctgttgctgcaa
ggcaaggtcgacgccaagggcgcacagattgccgccctggacctgagcgccaacgacaag
caacacctcaagctcagtgggcaactggactggagcgaaggttttgccgccgaggccaag
ctggcctggctggacttcccctggcaccgtctgtatccgctgattgacgagccggcggtg
cgggtccgcagttttgatgccgaagtggcttaccgtgacggtaactacctgggcaacttc
aagggcgacctggacggcccggcaggcgcgttcagcctgagcagcccgttcagcggcgac
ctgacgaaaatctatctgccgcagttcaagctggcggcgggccagggcaaggccgagggc
cacctgaacctgcagttcgccgacggcattgcctgggataccgccctggatctgtcggcc
atcaaccccgcgtactgggtggcggagctgcccggaaccctggccggccccctgcgcagc
cagggcgaaatgaagaaccagcaactcaagctcaatgccaacctcgacctcaagggacgc
ttgcgcggacagccggcggttctccaggccaaggccgacggagcggacgagcaatggacc
ctgggcgcgctggacatccgcctgggagacaaccggatcaacggctccggcagcctgcaa
cagaagatcaccggccagctggatatcaagatgccgcgcctgggtcagctctggcccgag
ttgcgtgggcagctcaacggtcggctggacctggccggcaccctcaaggcgccacagggc
aagctggacctggccgggcagcaactggcctttgccgaaaaccgcctgcagaacctcaag
ttggacgccactctggatggcgcgcaaaaggcccaggtggacctcaagggcagcgggatt
caactgggcgacacgcagttggggaccctgaccctggccggccagggcgacatcaagaaa
cagaaactgcaactggacctgcaaggaccgctgttgaaactggccctgggcctggatggc
gccctggaccagggcagctggcgcgggcgcctggccagcggcgatgtacagaccggcggc
caggactggaagctgcagaacccggcccggcttgagcggctggccaacggcacgctgaac
ttcggtgcccactgctgggccagcggcgatgccagcctgtgcggtgaagaccagcggctg
atgccggacccgaaactgcgttatcacctcaagcgttttcccctcgacagcctggcgcag
tggttgcccaaggatttcgcctggaagggcatgctcaatgccgatgtgcaattggacttg
ccggccagcgggccccagggccagatcatgctggacgccagcggtggtaccctgcgggtc
aaggaaaaggaccagtggctggatttcccctatcaggcattgaagctcaatacccgactc
accccgaggcgcatcgacacgcatttgcagttcgacggcggcaaactgggtgagctgatg
ctccaggcgcagatcaatcccttgccgaaaagcaaaccgctgtccggtgatttccgcctc
agcggcctggatctgtccgtggcgcggccgttcgtgcccatggtggaaaagctcagcggc
agcctcaatggcagcggtcgtttgtctggcggcctgctggcgcctcaggtcaacggcaac
gtgcagttgtccgggggcgaggtgtccggctccgagttgcccatcagccttgaagacctg
caactgagcgcgcagatcgctggcgagagcgtgcagctcaacggcggctggaaaagcggc
aaggccgggcagggcagcctcaatggcaacatcgcttggggccgggcgctattggtggac
ctgagcctcaagggcacccaactgccggtgacggtggagccctatgcggcgctggaggtg
gcgccggacctgaagatctcgctgcaggaggaaaagctggcgattgctggcaaggtgctg
atccccaagggccagatcaccgtgcgcgaattgccgccctcgacggtcaaggtctccgac
gacacggtgatcgtcggccagcagaccgacgacggcaaaaagcccatggccatggctatg
aacatcgatgtggaggtgggccaggacaagctggccttcagcggtttcggcctgactgcc
aacctgcaggggcacgtgcacattggtgacaatatggatacccgcggtgagctgtggctc
aacgacggccgctatcgggcctacggccagcgcttgaccgtgcgtcgtgcgcggctgctg
tttgccggccccatcgaccagccttacctggacatcgaggccgtgcgccagactgacgac
gtgattgccggcatccgcctgagcggcagcgccgagcaaccggcgacgcagatattttcg
gaaccggccatgagccaggaacaggcgctgtcctatctggttctggggcgcccgctgacg
tccaccggtgaagacaacaacatgctggcccaggcggctctcgggctggggctgatgggc
agctcggaactgaccggaggcattgccaagaacctgggcattcaagacttccaactcgat
acccagggcagcggcaacaacaccagcgtggtggccagcggcgccatttccgaaaggctc
agcctgcgctatggcgtcggggtctttgagcccgccagtaccatcgctctgcgttacaag
ctgagcaagaaggtctatctggaagcggcgagcggtttcgccagctccctggatatcttt
tacaagcgcgatttctga
DBGET
integrated database retrieval system