Pseudomonas protegens CHA0: PFLCHA0_c40940
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Entry
PFLCHA0_c40940 CDS
T02671
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00300
Lysine biosynthesis
pprc00470
D-Amino acid metabolism
pprc01100
Metabolic pathways
pprc01110
Biosynthesis of secondary metabolites
pprc01120
Microbial metabolism in diverse environments
pprc01230
Biosynthesis of amino acids
Module
pprc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFLCHA0_c40940
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFLCHA0_c40940
Enzymes [BR:
pprc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PFLCHA0_c40940
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Paralog
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AGL85858
UniProt:
A0A2C9EQR4
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All DBs
Position
complement(4593752..4594747)
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AA seq
331 aa
AA seq
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MAAFYDARGNIYGVVTPARLRSLGVALPGSAAQAARDRRLWSEQAIAALCDWAPGTRPPG
AKAHRSDGLLVGPFQDVAPFDLLIVNTDGTLAERSGNGLTIFSQALAEQGLLAEQGPTLL
QVHHDQPTGTSPVATVVEPARVAGVPGFWLDLGQPSFGPEAVAAIGVEAVTLNGRELSRV
APLQALDPRWEHSQFVRIGNPHCVTLLEDAEALPGNPQMLEAPLAEGLTATAFALPLGSG
EPCPAGVNLQWAARESAQRIVARVFERGEGPTASSGTSASAVACAAWRVGWVKAGRVEVL
MPGGTAPLMLQETDGVLTRVSLFGTALALAE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttctacgatgcacggggcaacatctatggggtggtgacacccgcgcggttg
cgcagcctgggggtcgccttgcccggcagcgccgcgcaggccgcgcgggaccggcgcttg
tggagcgagcaggccatcgccgccctctgtgactgggctccgggcacccgcccgccgggg
gccaaggcccaccgtagcgacggtctgctggtggggccgttccaggacgtggcgcccttc
gatctgctgatcgtcaacaccgacggcaccctggccgagcgcagtggcaatggtttgacg
atcttttcccaggccctggccgagcaggggttgctggccgagcaggggccaaccctgttg
caggtgcaccatgaccagcccaccggtacctcgccggtggccaccgtggtggagccggcc
cgggtggcgggggtgccagggttctggctggacctcggccagccgtccttcgggcccgag
gcggtggccgccattggcgtcgaggcggtgaccttgaacggtcgcgagctgagccgggtg
gcaccgttgcaggcactcgacccgcggtgggagcacagccagttcgtgcgcatcggcaac
ccgcactgcgtgaccctgctggaggatgccgaggccttgcccggcaacccgcagatgctc
gaagcgccactggccgaagggctgacggccactgcttttgccttgcccctgggcagcggc
gaaccctgcccggcgggggtcaacctgcaatgggcggcgcgggaatcggcgcagcgcatc
gtcgcccgggtgttcgaacgcggcgaagggccgaccgcctcttcgggcaccagcgccagc
gccgtggcctgcgcggcgtggcgggtgggctgggtcaaggccggacgggtcgaagtgctg
atgccgggcggcaccgcgcccttgatgttgcaagagaccgacggggtgttgacccgggtg
agcctgttcggcacggcgctggcactggctgagtga
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