Pseudomonas protegens CHA0: PFLCHA0_c41500
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Entry
PFLCHA0_c41500 CDS
T02671
Symbol
syrD
Name
(GenBank) ATP-binding protein SyrD
KO
K06160
putative pyoverdin transport system ATP-binding/permease protein
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PFLCHA0_c41500 (syrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprc02000
]
PFLCHA0_c41500 (syrD)
Transporters [BR:
pprc02000
]
ABC transporters, eukaryotic type
Other subfamilies
Other ABC transporters
PFLCHA0_c41500 (syrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_16
AAA_22
AAA_23
ABC_ATPase
AAA_14
MobB
AAA_15
AAA_29
AAA_5
nSTAND3
AAA_19
YLATT
Zeta_toxin
RsgA_GTPase
ATPase_2
NACHT
Rad17
PSI_PSAK
AAA
NB-ARC
ORC-CDC6-like
DLIC
TsaE
AAA_7
RNA_helicase
Viral_helicase1
SUR7
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AGL85914
UniProt:
A0A2C9EQH2
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All DBs
Position
4661632..4663284
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AA seq
550 aa
AA seq
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MTDPKRGAFNGLLALLRPFRTIVVISVALGMAGGLAITLLLATINNALHSATGMTQGVVL
TFAALCVLALVSSIVSDIGTNYVGQRIIAALRKDLGEKVLSAPITQIERYRSHRLIPVLT
HDVDTISDFSFAFTPLAIATTVTLGCLGYLAYLSVPMFLMMVVAIIIGTSVQLVAGGKGI
KGFDEARDHEDELQRYYNAIASGAKELRIHRPRRFRMNTQRIQKTADRISDIQVRSVNIY
ILAKSFGSMLFFVVIGLALAMQAYYPNPDPAVITGFVLVLLYMKGPLEHVVGYLPIVGKA
KIAFARISELSERFSSPEPHLLMDDSEAPQAVVHSLELREVRYSPPPVEGSEPFHLGPIN
LNIKQGDIVFIVGENGCGKTTLIKLLLGLYQPQSGEIRLNGEAVTDRARDDYRQLFTTVF
ADYYLFDDLVQGNAGKSLDVATQYLNRLEIAHKVSVKDGAFTTTDLSTGQRKRLALVNAW
LEERPVLVFDEWAADQDPAFRRIFYTELLPDLKRLGKTIIVISHDDRYFDIADQLVRMKA
GRVLTELQPA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccccaagcgcggcgccttcaacggtctgctcgcattgctcaggccctttcgc
accatcgtggtgatctccgttgccctgggcatggccggcggcctggccatcaccctgttg
ctggccaccatcaacaacgccctgcactcggcgaccggcatgacccaaggcgtggtcctg
accttcgccgccctgtgcgtgctggccctggtcagttccatcgtctcggacatcggcacc
aactatgtgggacaacggatcattgccgccctgcgcaaggacctgggtgaaaaagtactc
tcggcgcccatcacccagatcgagcgctatcgctcccaccgcctgatcccggtactgacc
cacgacgtcgacaccatcagcgacttctctttcgccttcactcccctggccatcgccacc
accgtcaccctgggttgcctgggctacctggcgtacctctcggtgccgatgttcctgatg
atggtggtggccatcatcatcggcaccagtgtgcagctggtggccggcggcaagggcatc
aagggcttcgatgaggctcgcgaccatgaggacgagctgcagcgctactacaacgcgatc
gcctccggtgccaaggaactgcgcattcaccggccccggcgctttcgcatgaatacccag
cgcatccagaaaaccgcggatcgcatcagcgatatccaggtgcgctcggtaaacatctac
atcctggccaagagcttcggctcgatgctgttcttcgtggtcatcggcctggccctggcc
atgcaggcctactacccgaacccggaccctgcggtgatcaccggtttcgtgctggtgctg
ctgtacatgaagggcccgctggaacacgtggtcggctacctgcccatcgtcggcaaggcc
aagatcgccttcgcccggatcagcgaactgtccgaacgcttctcttctcccgagccgcac
ctgctgatggacgacagcgaagcgccgcaagcggtggtgcacagcctggaactgcgcgag
gtgcgctacagcccgccgccggtggaaggcagcgaaccgttccacctgggcccgatcaac
ctgaacatcaagcagggcgacatcgtcttcatcgtcggcgagaacggctgcggcaagacc
accctgatcaagctgttgctgggcctgtaccagccccagtccggggagatccgtctcaat
ggcgaagcggtgaccgaccgggcccgggatgactaccggcagctgttcaccacggtattt
gccgactactacctgttcgacgacctggtccagggcaatgccggcaagtcgctggacgtc
gccacccagtacctgaaccgcctggaaatcgcccacaaggtcagcgtcaaggatggcgcc
ttcaccaccaccgacctgtccaccggccagcgcaagcgcttggccctggtcaatgcctgg
ctggaagagcgcccggtgctggtgttcgacgaatgggccgccgaccaggacccggccttc
cggcggattttctacaccgagctgctgcccgatctcaagcgcctgggcaagaccatcatc
gtgatcagccacgacgatcgctacttcgacattgccgaccagttggtgcgcatgaaggcc
ggacgagtcctgactgaactgcaaccggcgtga
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