KEGG   Pseudomonas protegens CHA0: PFLCHA0_c41500
Entry
PFLCHA0_c41500    CDS       T02671                                 
Symbol
syrD
Name
(GenBank) ATP-binding protein SyrD
  KO
K06160  putative pyoverdin transport system ATP-binding/permease protein
Organism
pprc  Pseudomonas protegens CHA0
Pathway
pprc02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:pprc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    PFLCHA0_c41500 (syrD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pprc02000]
    PFLCHA0_c41500 (syrD)
Transporters [BR:pprc02000]
 ABC transporters, eukaryotic type
  Other subfamilies
   Other ABC transporters
    PFLCHA0_c41500 (syrD)
SSDB
Motif
Pfam: ABC_tran ABC_membrane AAA_21 SMC_N AAA_16 AAA_22 AAA_23 ABC_ATPase AAA_14 MobB AAA_15 AAA_29 AAA_5 nSTAND3 AAA_19 YLATT Zeta_toxin RsgA_GTPase ATPase_2 NACHT Rad17 PSI_PSAK AAA NB-ARC ORC-CDC6-like DLIC TsaE AAA_7 RNA_helicase Viral_helicase1 SUR7 AAA_13
Other DBs
NCBI-ProteinID: AGL85914
UniProt: A0A2C9EQH2
LinkDB
Position
4661632..4663284
AA seq 550 aa
MTDPKRGAFNGLLALLRPFRTIVVISVALGMAGGLAITLLLATINNALHSATGMTQGVVL
TFAALCVLALVSSIVSDIGTNYVGQRIIAALRKDLGEKVLSAPITQIERYRSHRLIPVLT
HDVDTISDFSFAFTPLAIATTVTLGCLGYLAYLSVPMFLMMVVAIIIGTSVQLVAGGKGI
KGFDEARDHEDELQRYYNAIASGAKELRIHRPRRFRMNTQRIQKTADRISDIQVRSVNIY
ILAKSFGSMLFFVVIGLALAMQAYYPNPDPAVITGFVLVLLYMKGPLEHVVGYLPIVGKA
KIAFARISELSERFSSPEPHLLMDDSEAPQAVVHSLELREVRYSPPPVEGSEPFHLGPIN
LNIKQGDIVFIVGENGCGKTTLIKLLLGLYQPQSGEIRLNGEAVTDRARDDYRQLFTTVF
ADYYLFDDLVQGNAGKSLDVATQYLNRLEIAHKVSVKDGAFTTTDLSTGQRKRLALVNAW
LEERPVLVFDEWAADQDPAFRRIFYTELLPDLKRLGKTIIVISHDDRYFDIADQLVRMKA
GRVLTELQPA
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaccgaccccaagcgcggcgccttcaacggtctgctcgcattgctcaggccctttcgc
accatcgtggtgatctccgttgccctgggcatggccggcggcctggccatcaccctgttg
ctggccaccatcaacaacgccctgcactcggcgaccggcatgacccaaggcgtggtcctg
accttcgccgccctgtgcgtgctggccctggtcagttccatcgtctcggacatcggcacc
aactatgtgggacaacggatcattgccgccctgcgcaaggacctgggtgaaaaagtactc
tcggcgcccatcacccagatcgagcgctatcgctcccaccgcctgatcccggtactgacc
cacgacgtcgacaccatcagcgacttctctttcgccttcactcccctggccatcgccacc
accgtcaccctgggttgcctgggctacctggcgtacctctcggtgccgatgttcctgatg
atggtggtggccatcatcatcggcaccagtgtgcagctggtggccggcggcaagggcatc
aagggcttcgatgaggctcgcgaccatgaggacgagctgcagcgctactacaacgcgatc
gcctccggtgccaaggaactgcgcattcaccggccccggcgctttcgcatgaatacccag
cgcatccagaaaaccgcggatcgcatcagcgatatccaggtgcgctcggtaaacatctac
atcctggccaagagcttcggctcgatgctgttcttcgtggtcatcggcctggccctggcc
atgcaggcctactacccgaacccggaccctgcggtgatcaccggtttcgtgctggtgctg
ctgtacatgaagggcccgctggaacacgtggtcggctacctgcccatcgtcggcaaggcc
aagatcgccttcgcccggatcagcgaactgtccgaacgcttctcttctcccgagccgcac
ctgctgatggacgacagcgaagcgccgcaagcggtggtgcacagcctggaactgcgcgag
gtgcgctacagcccgccgccggtggaaggcagcgaaccgttccacctgggcccgatcaac
ctgaacatcaagcagggcgacatcgtcttcatcgtcggcgagaacggctgcggcaagacc
accctgatcaagctgttgctgggcctgtaccagccccagtccggggagatccgtctcaat
ggcgaagcggtgaccgaccgggcccgggatgactaccggcagctgttcaccacggtattt
gccgactactacctgttcgacgacctggtccagggcaatgccggcaagtcgctggacgtc
gccacccagtacctgaaccgcctggaaatcgcccacaaggtcagcgtcaaggatggcgcc
ttcaccaccaccgacctgtccaccggccagcgcaagcgcttggccctggtcaatgcctgg
ctggaagagcgcccggtgctggtgttcgacgaatgggccgccgaccaggacccggccttc
cggcggattttctacaccgagctgctgcccgatctcaagcgcctgggcaagaccatcatc
gtgatcagccacgacgatcgctacttcgacattgccgaccagttggtgcgcatgaaggcc
ggacgagtcctgactgaactgcaaccggcgtga

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