Pseudomonas protegens CHA0: PFLCHA0_c41960
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Entry
PFLCHA0_c41960 CDS
T02671
Symbol
stc2
Name
(GenBank) signal-transduction and transcriptional-control protein Stc
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprc03000
]
PFLCHA0_c41960 (stc2)
Transcription factors [BR:
pprc03000
]
Prokaryotic type
Helix-turn-helix
Other families
PFLCHA0_c41960 (stc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
AAA_2
HTH_30
Mg_chelatase
AAA
DUF134
HTH_1
HTH_28
HTH_7
HTH_20
HTH_22
Mga
AAA_7
HTH_29
HTH_50
HTH_11
HTH_23
PAS_9
HTH_17
AAA_16
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AGL85960
UniProt:
A0A2C9EQL4
LinkDB
All DBs
Position
complement(4742322..4744226)
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AA seq
634 aa
AA seq
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MTLIKTIKGEQQHEARLARERLHLEGQIPDGVLRAEIDASWRRSLSHGVHFGSQHQLTLE
SSASLEVLLASNRLLLDAAIPAIDYLSQHQGKDGMIILANADATILAIEGRADRLKDSGV
QDITLGACWSEATRGTNALGTALVEARPTLIDCGEHYLDRLSHFSCTSVPIQCPQGEILG
VLDLTREGPLGRAQDSTALLAMAVSQIEARVFHATYPEQIVLAFHSRRQYLESPWQGLLA
LSLGGQILAVSGQACQLLNTPRAALVGRRCEEFLGVDGLQLLARLQQGAVGSLQTAKGEL
FYKALRAPQPALNLHRAPRSAPKAAAMPQDLEALAGGNSRYARTLRMARQGLANDLPVLL
LGETGTGKEVLARALHRAGSRAEKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRGGMI
GRLQQAHGGTLFLDEIGDMPLALQARLLRVLQDRKVAPLGAGEEQDIDIALICATHRDLK
QQVQDKAFREDLFYRVNGISVLLPALREREDLQPLVDSLLAKLGGAQVSLSDELRRLLAD
YHWPGNIRQLEMVLRTALALREDGECHIGLEHLPDSMLDDLNASARPQTGSIRENELELI
RSALDNHQGNVSAAADALGISRATLYRKLKQLRA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgactcttataaaaacaataaagggtgagcagcaacacgaagcccggctggcccgggaa
cggctgcacctggaaggccagatccccgacggggttctgcgtgcggaaatcgatgcctca
tggcggcgcagcctcagccatggcgtgcactttggcagccagcaccaactgaccctggaa
tccagcgccagcctcgaagtgctgctggccagcaaccgcctgttgctggacgcggcgatc
ccggccatcgactacctgagccagcatcagggcaaggacgggatgatcatcctggccaat
gccgacgccaccatcctggccatcgaaggccgcgccgaccgtctcaaggacagcggcgtg
caggacatcacccttggcgcctgctggagcgaagccacccgcggcaccaacgccctgggc
acggccctggtggaggcccggccgaccctgatcgactgcggcgagcactacctggaccgt
ctcagccatttttcctgcacctcggtgcccatccagtgcccccagggcgagattctgggc
gtgctcgacctgacccgcgaaggccccctgggccgggcccaggacagcaccgcgctgctg
gccatggcggtcagccagatcgaagcccgggtgttccatgccacctacccggagcagatc
gtcctggccttccacagccgccggcaatacctcgaatcaccgtggcaggggctgctggcc
ctgagcctgggcgggcagatcctcgcggtcagcggccaggcctgccagttgctcaacacc
ccgcgcgcagccctggtgggccggcgctgcgaagagttcctcggggtcgatggcctgcaa
ctgctcgcacgcctgcaacagggcgccgtgggtagcctgcaaaccgccaagggcgagctg
ttctacaaggccctgcgggcgccgcagccagcgctcaacctgcaccgcgcgccacgcagc
gctccgaaagccgcagccatgccccaggacctggaagccctggccgggggcaacagccgt
tacgcccgcaccttgcgcatggcccgtcagggcctggccaatgacctgccggtgttgcta
ctgggcgaaaccggcaccggcaaggaagtcctggcccgggccctgcaccgcgccggcagc
cgcgccgagaaaccctttgtcgcggtcaactgcgcggcgatccccgaaggcctgatcgag
tcggaactgttcggctatcgcgaaggcgccttcaccggctcgcgtcgtggcggcatgatc
gggcgcctgcaacaggcccacggtggcaccctgttcctcgatgagatcggcgacatgccc
ctggccctgcaagcccgcctgctgcgcgtgctgcaggaccgcaaggtggcgcccctgggg
gccggcgaagaacaggacatcgacatcgccctgatctgcgccacccaccgcgacctcaag
cagcaggtgcaggacaaggcttttcgcgaagatctgttctaccgggtcaacggcatcagc
gtgctgttgccggccctgcgcgaacgcgaagacctgcagcccctggtggacagcttgctg
gccaagctcggtggcgcccaggtgagccttagcgatgagctgcgtcggctgctggcggac
taccactggccgggcaatatccgccagctggagatggtcctgcgcacagccctggccctg
cgcgaagacggtgagtgccacatcggcctggagcacctgcccgacagcatgctcgacgac
ctcaatgccagtgcccgaccgcagaccgggagcatccgcgagaatgagctggagctgatt
cgcagtgccctggacaaccaccagggcaatgtctcggcggcagcggacgctctgggcatc
agccgcgcgaccctgtaccgcaagctcaaacagttgcgcgcctga
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