Pseudomonas protegens CHA0: PFLCHA0_c42240
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Entry
PFLCHA0_c42240 CDS
T02671
Name
(GenBank) ATP-dependent helicase
KO
K04067
primosomal replication protein N''
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PFLCHA0_c42240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprc03400
]
PFLCHA0_c42240
DNA repair and recombination proteins [BR:
pprc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFLCHA0_c42240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
MTES_1575
Pkinase
AAA_11
DUF4011
PK_Tyr_Ser-Thr
AAA_19
UvrD-helicase
SLFN-g3_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AGL85983
UniProt:
A0A2C9EQP1
LinkDB
All DBs
Position
4773380..4779706
Genome browser
AA seq
2108 aa
AA seq
DB search
MIRFCPNCQTERPLAEIFCEGQVDNRACGWELSAEAIHPEGWRPQPVVTLEALEPQPPVA
ADSGSPLLCGNGHAMVDGDLMCLVCGADPLAPEQQPPAAPPAADSETVIEGWRLLRQISS
GGVRERFIAEHRETAHQAVLTLYQAGAEPDPSVYEALKRLPREHVPEIILTGRWDERAFE
VAEELTGGTLADLGIVVSDRAAVQHIVRELGQALHAFSEAGLRHRDLRPATLLVRSREPL
DLVISGFGSARLSEFDLDIVSPLETSRYMAPEAIAGGVAAASDWWSLGMILLEQLTQGEC
FAGINANAYLIHILANGVLLPDDLDPRLELLLRGLLARDRHQRWQWPQVQAWLQGESPSV
PASVASEEDAEEGASIALGSRRFRRPGPFALAAAEVEHWPQALDHLLRGVIVTWAEQAGL
PARQLAGLRQVAQHEGLDDDTRLMLALKLLNPEMPLIQRGEIVTPGWLLEHPLDGYRLIS
GPAPDLLERLETEHWLSRLKLRAEQVRQRAQHQAIELDEEQLRIYLLSSSRARLAAQWEE
RQRLLPDSEHNGILSLADRRSISEEDLIVLLSAAIGQFRSVDAILEEAATLAREAVVLSF
DAASARALLGLPRPALYREVDERISGFARCGVPSVDEWAEQFRLERRMPLARALVLLAIG
AEQWLEPQKQHYVSQILDFFEKKVASVVLRGPLVRMSIGKTTARVDLNELHSERSPAPAL
LDHLVARNAQPISLDPACFAENLQLDARLNSLYRQSSLYKRDTGIDGLYLGFPFLLTRDA
RGTTRTRIAPLLLWPVKLLLEVGSRGKVALVFDSEREEVRLNPGLDTLLGIDAAKLWRKA
ADELLGRSALKAADVMDAFGMLATASSRVLGSLPPPSTEVQPYQDQLACAAVLFHVAFMG
QAIGEDLRQLKALPPGGTGLETALRLNPAEPDSGDSGDSAATALAPELQRFFTVASDPSQ
EAAVLQARQAPGLLVEGPPGTGKSQTIVNMVADAIGRQRSLLIVCQKHAALEVVHKRLVA
EGLGNRVVMLNDINRDREPVIRSVREQLEALFKDDAVQQPWLHQRERLAARIEALEGELD
RFHQSLHRIDEHCGLSYRQLIGELIGLEQGPAALDVPVLRQHLAALDIASLTRLEEACAP
LIRLWLPARYEHSALAQLQPFPTDAATVQAFNQGFERLLSCEEQRLETLQAHPADFEVDD
PAPYRAWLDQHLHSLLGLDDERRQRLARWLPLFRGSNGQAAEGDGLIQALQALAQQLEQC
DATAYQADLAPGLSALPAAQLRTLQQRARAVIQGRSWLARLNPLRLIRQRQLLAFLAEQG
AAAQPQRLPELLAAALLESQWRPLRAQLQHLHQQLSLAQIASDCGPGLLPQVRQDLGQLQ
EMRALAMTLAQAPRVEQLDAVVLTGERRSLDSLLAGYDAAFIRHSVRQDSLNALQRLDQW
LQPELLGQLRQRVEHNQGNQSALNRLRDALPTLSAYQAFRARAGQLSPADLELLVVLRDY
QDTLDAIPAEQLEAVVRRMLNREARLGWKRQIEQRQPELMLEHSETAAKIASLGEADTQM
RNLNRQLLSEGIELSRLGTRKQWEDVTRLTGRRSRRLREFMEMGAGLGLMSLRPVWLMNP
DVASRVLPLKPGLFDTVIYDEASQMPVEFALPTLYRGRVTVVSGDEKQMPPTAFFSSRVE
SDEAELFDGDQPDADADEEQREAFEDTWNRREIKDCPDLLQLARSSLPATTLQIHYRSAY
RELIGFSNASFYGNRLSIPVRHPQANILAIKPLELIRVDGVYQQQVNPDEAERVVDYLAE
LWQAPYAERPSVGVVTFNRKQADLIEERLELRAEQDPAFRAAYSQERERSEDGEDMSVFV
KNVENVQGDERDIIVFSSTFGRNSQGSFRRNFGVLGQTGGERRLNVAVTRARRKVVMITS
MPIADISDMLTTQRPPASPRDYLQGYLEYARALSAGEFASGHSLLGRLVTERQDAKVQHN
AHSDGFTQAVAAFIRTLGWSPVSANEGDAFGLDFAIEHPDTGLYALGIECDTPRHGLLAR
ARSREIWRPSVLRRAIPHLHRVSSQAWYHDPEGERARLQAAIEQALQPLAGADSVTQPQA
LADTEQTP
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtttttgccccaattgccagactgaacgcccactggccgaaattttctgtgaa
ggccaggtagacaaccgggcctgcggctgggaactttccgccgaagcgattcatcccgaa
ggctggcgcccacaaccggtagtcaccctcgaagcgcttgagccgcagcccccggtcgcg
gcggacagcggctcccccctgctctgcggcaacggtcatgccatggtggacggcgacttg
atgtgcctggtctgcggcgccgacccgctcgccccggagcaacagccacccgccgcgccc
ccagccgccgacagtgaaaccgtgatcgaaggctggcgcctcctgcgccagatcagcagc
ggcggcgtgcgcgagcgctttatcgccgagcaccgggaaaccgcgcaccaggcggtgctg
accctgtaccaggccggcgccgaacccgacccatcggtgtacgaagccctcaagcgcctg
ccccgggaacacgtgccggaaatcatcctcaccggccgctgggacgagcgcgccttcgaa
gtggctgaagaactcaccggcggcaccctggccgacctggggatcgtggtcagcgacagg
gccgcggtgcagcacatcgtccgtgaactgggccaggccctgcatgccttcagcgaagcc
ggcctgcgccaccgcgacctgcgcccggccaccttgctggtgcgcagccgcgagcccctg
gacctggtgatcagcggcttcggttcggcgcggctgtcggagttcgacctggacatcgtc
tcgcccctggaaaccagccgctacatggcccccgaagccattgccgggggcgtggccgcg
gcctccgactggtggagcctggggatgatcctgctggaacagctgacccagggagaatgc
ttcgccggcatcaatgccaacgcctacctgattcacattctggccaacggcgtgctgctg
ccggatgacctcgacccgcgcctggaactgctgctgcgcggcctgctggcccgggaccgc
caccagcgctggcaatggcctcaggtgcaggcctggctccagggcgaaagccccagcgtc
ccggcctcggtcgccagtgaagaggacgccgaggaaggcgccagcatcgccctgggcagc
cggcgctttcgccggccagggccgttcgccctggctgccgccgaagtcgaacactggccc
caggccctggatcatctgctgcgcggggtgatcgtcacctgggccgaacaggccggtttg
cccgcacggcagctggcgggcctgcgccaggtggcccagcacgaagggctggacgatgac
acccggctgatgctcgccttgaaactgctgaacccggaaatgcccctgatccagcgcggc
gagatcgtcacccccggctggttgctggagcatcccctggacggttaccgcttgatcagc
ggcccggccccggacctgctggaacgcctggagaccgagcactggctgtcgcggctcaag
ctgcgggccgaacaggtacgccagcgcgcccagcaccaggccatcgaactggacgaggag
caactgcgcatctacctgctctccagctcccgcgcccgtctggccgcacagtgggaagaa
cgccagcgcctgctgccggacagcgagcacaacggcatcctgtccctggcggaccgccgc
tccatcagcgaagaagacctgatcgtgctgctcagcgccgccatcgggcagttccgctcg
gtggacgcgatcctcgaagaagccgccaccctggcccgcgaagccgtggtcctgagcttc
gatgcggccagtgcgcgtgccctgctggggctgccgcgcccggccttgtaccgtgaagtc
gatgagcgcatcagcggcttcgcccgttgtggcgtgccaagcgtcgatgaatgggccgag
cagttccgcctggaacgccgcatgcccctggccagggccctggtgctgctggccatcggc
gcagagcagtggctggagccgcaaaagcagcactacgtgtcgcagatcctcgacttcttc
gagaagaaggtcgccagcgtggtgctgcgcggcccgctggtgcgcatgagcatcggcaag
accaccgcccgggtcgacctcaacgaattgcacagtgagcgcagcccggccccggcgctg
ctggatcacctggtggcgcgcaacgcccagcccatcagcctcgacccggcgtgcttcgcc
gaaaacctgcagctggatgcacggctcaacagcctgtaccgccagagttcgctgtacaag
cgcgacaccgggatcgatggcctgtacctgggcttccccttcctcctgacccgggacgcg
cgtggcaccactcgcactcgcatcgcgccgttgctgctgtggccggtcaagctgctgctg
gaagtcggcagccgcggcaaggtggccctggtcttcgacagcgagcgtgaagaggtgcgc
ctcaatccggggctcgacaccttgctgggcatcgatgccgccaagctctggcgcaaggcc
gccgatgaactgctggggcgttcggcgctcaaggccgccgacgtgatggacgccttcggc
atgctggccactgccagctcccgggtgctcggcagcctgccaccgccgagcaccgaagtg
cagccctaccaggatcaactggcctgtgccgccgtgctgttccatgtggccttcatgggc
caggccatcggcgaggacctgcgccagctcaaggccctgccccccggcggcaccggcctg
gaaaccgccctgcgcctgaaccccgcggagcccgacagcggcgacagcggcgacagcgct
gccaccgcgctcgcgcctgaactgcagcgcttctttaccgtggccagcgacccctcccag
gaagccgcggtgctccaggcccgacaggcccccgggctgctggtggaaggcccgcccggc
accggcaagagccagaccatcgtcaacatggtggccgacgccatcggccgccagcgcagc
ctgctgatcgtctgccagaagcacgccgccctggaagtggtgcacaagcgcctggtggcc
gaaggcctgggcaaccgggtggtgatgctcaacgacatcaaccgtgaccgcgaaccggtg
atccgcagtgtccgcgaacagcttgaggccctgttcaaggacgatgccgtccagcaaccc
tggctgcaccagcgtgaacgcctggcggcacgcatcgaagccctggagggcgaactggat
cgcttccaccagagcctgcaccgcatcgatgaacactgtggcttgagctaccgccagttg
atcggcgagctgatcggcctggaacaggggccagcggccctggatgtcccggtattgcgc
cagcacctggcggccctggacatcgccagcctgacccgcctggaagaggcctgcgcgccg
ctgatccgcctgtggctgccggcccgctatgaacacagcgccctggcccagctccagccc
ttccccaccgacgccgccacggtgcaagcgttcaaccagggcttcgagcgcctgctgagc
tgcgaggagcagcgcctggaaaccctgcaggcacacccggccgacttcgaagtcgacgac
ccggcgccctaccgcgcctggctcgaccagcacctgcacagcctgctgggcctggacgat
gagcgtcgccaacggctggcacgctggctcccgctgtttcgtggcagcaacggccaggcc
gcagaaggcgacgggctgatccaggccctgcaggcactggctcaacaactggaacagtgc
gacgccaccgcttaccaggccgacctggcgccgggcctcagcgccctgcccgcggcccaa
ctgcgcaccctgcagcaacgcgcccgcgccgttatccagggtcgctcctggctggcgcgg
ctcaacccgctgcgcctgatccgccagcgccagttgctggccttcctcgccgaacagggc
gccgcggcccagccgcagcgcctgccagaactgctggcggcggccctgctggaaagccag
tggcggcccttgcgcgcgcagttgcaacacctgcatcagcaactgagccttgcacaaatc
gccagcgattgcggcccgggcctgctgccgcaggtacgccaggacctcgggcaactgcaa
gaaatgcgcgccctggccatgaccctggcgcaagccccccgggtggagcagttggatgcg
gtggtactgaccggcgagcggcgctctctggacagcctgctggccggctacgacgccgcg
tttatccgccacagcgtgcgccaggacagcctgaatgccctgcagcgcctggatcagtgg
ctgcaacccgagctgctgggccaactgcgccagcgcgtggagcacaaccagggcaatcag
tcggccctcaaccgcctgcgcgacgccttgccgaccctgagcgcctaccaggctttccgg
gcccgggccggccagctgtcgccggcggacctggagttgctggtagtcctgcgcgattac
caggacacgctcgacgccattcccgccgagcaactggaagccgtggtgcggcgcatgctc
aaccgcgaagcacggctgggctggaagcgccagatcgaacaacgccaacccgagctgatg
ctcgagcacagcgaaaccgcggcgaagatcgccagcctgggcgaagccgacacccagatg
cgcaacctcaaccgtcagttgctcagtgaaggcatcgagctgtcgcgcctgggcacccgc
aaacagtgggaggacgtcacccgcctcaccgggcgtcgttcgcgacgcttgcgcgagttc
atggaaatgggcgccggcctggggctgatgagcctgcgcccggtgtggctgatgaacccg
gacgtggccagccgggtgttgccgctcaagcccgggctgttcgatacggtgatctacgac
gaagcctcgcagatgccggtggagttcgccctgccgaccctgtaccggggccgggtcacg
gtggtcagcggcgacgagaagcagatgccgcccaccgccttcttctccagccgggtggaa
agcgacgaagccgaactgttcgatggcgaccagccggacgccgatgccgacgaggaacaa
cgggaggccttcgaagacacctggaaccgccgcgaaatcaaggactgcccggacctgctg
caactggctcgcagctcgctacccgccaccaccctgcagatccactaccgctcggcctac
cgcgagctgatcggtttctccaacgcctcgttctacggcaaccgcctgagcatcccggta
cgccatccccaggccaatatcctcgccatcaagccgctggagctgatccgcgtggacggc
gtctatcagcagcaggtcaaccccgacgaggccgaacgggtggtggactacctggccgag
ctctggcaggcgccctatgccgaacgcccctcggtgggcgtggtgaccttcaaccgcaag
caggccgacctgatcgaagagcgcctggagttgcgcgccgagcaggatccggcgtttcgt
gcggcctacagccaggagcgcgaacgcagcgaggacggcgaggacatgtcggtgttcgtc
aagaacgtcgagaacgtccagggcgatgagcgcgacatcatcgtgttctcctcgaccttc
gggcgtaacagccagggcagcttccgccgcaacttcggggtcctggggcagaccggcggc
gagcgccggctcaatgtggcggtgacccgggcccggcgcaaagtggtgatgatcacctcg
atgccgattgccgatatctccgacatgctcaccacccagcgcccgcccgccagcccgcgg
gactacctgcaaggctacctggagtacgcccgcgccctgtcggccggggagtttgccagc
ggccacagcctgctggggcgcctggtcaccgagcgccaggatgcaaaggtccagcacaac
gcccacagcgacggcttcacccaggcggtggcggcgttcatccgtacccttggctggagc
ccggtcagcgccaacgaaggggatgccttcggcctggactttgccatcgagcaccccgat
accgggctctacgctctgggcatcgaatgcgataccccgcgccacggcctcctggcccgc
gctcgctcccgggaaatctggcgcccttcggtgctgcgccgggccattccccacctgcac
cgggtctcgtcgcaggcctggtaccacgaccctgaaggcgagcgcgctcgcctgcaggcc
gccatcgagcaggccctgcagccgctggccggcgccgattcggtcacgcagccccaagcc
ctggcagatacggagcaaaccccatga
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