Pseudomonas protegens CHA0: PFLCHA0_c43780
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Entry
PFLCHA0_c43780 CDS
T02671
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprc03032
]
PFLCHA0_c43780 (ihfB)
03036 Chromosome and associated proteins [BR:
pprc03036
]
PFLCHA0_c43780 (ihfB)
03400 DNA repair and recombination proteins [BR:
pprc03400
]
PFLCHA0_c43780 (ihfB)
DNA replication proteins [BR:
pprc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PFLCHA0_c43780 (ihfB)
Chromosome and associated proteins [BR:
pprc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PFLCHA0_c43780 (ihfB)
DNA repair and recombination proteins [BR:
pprc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PFLCHA0_c43780 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AGL86137
UniProt:
A0A2C9ER49
LinkDB
All DBs
Position
complement(4957801..4958088)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEEI
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcaagggctgctctcatccaag
gatgtcgagttggcgataaagaccatgcttgaacagatgtcacagtgtctggctaccggt
gatcgaattgagattcgaggatttggtagtttctctcttcactatcgtgctcctcgcgta
ggcagaaatccaaaaactggtcaatcagtcagtctggatggcaagtttgtacctcatttc
aaaccgggtaaagagttgagagatcgtgtcaatgaagaagaaatttaa
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