Pseudomonas protegens CHA0: PFLCHA0_c43800
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Entry
PFLCHA0_c43800 CDS
T02671
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PFLCHA0_c43800 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pprc03011
]
PFLCHA0_c43800 (rpsA)
Ribosome [BR:
pprc03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PFLCHA0_c43800 (rpsA)
Bacteria
PFLCHA0_c43800 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AGL86139
UniProt:
A0A2C9ERA3
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All DBs
Position
complement(4958707..4960401)
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AA seq
564 aa
AA seq
DB search
MSESFAELFEESLKTLNLQAGSIITGVIVDIDYQARWVTVHAGLKSEALIPLEQFYNDAG
ELSINVGDEVHVALDSVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKG
GFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAEN
SAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVG
DEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRVTARVTNLTDYGCFAELEE
GVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFS
GQFNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTV
ILSVDPERERISLGIKQLESDPFSEYVQENDKGAIVKGVVKEVDAKGAIITLANDIEATL
KASEISRDRIEDARNVLKEGEEVEAKIISVDRKSRVIQLSIKSKDVEDEKEAIQSLRDKP
AASDIAAGPTTLGDLLRAQMEKQN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgcggaactctttgaagaaagcctaaaaaccctgaaccttcaggca
ggctccatcatcaccggtgttatcgtcgacatcgactaccaagcgcgttgggtaaccgtt
cacgctggtctgaagtctgaagcgctgatcccgcttgagcagttctacaacgatgctggc
gaactgtccatcaatgttggtgatgaagttcacgttgctctggattcggttgaagacggc
tttggtgaaaccaagctctcccgtgaaaaagccaagcgcgctgaatgctggatcgttctg
gaagcagccttcgcagccgaagaagtggtcaagggcgttatcaacggtaaggttaaaggc
ggcttcactgtcgacgttaacggcatccgtgcgttcctgccaggttctctggttgacgtc
cgtccagtgcgcgacaccacgcacctggaaggcaaagagctcgagtttaaagtcatcaaa
ctcgaccagaagcgcaacaacgttgtcgtttcccgccgcagcgtcctcgaagccgagaac
tccgctgagcgtgaagctctgctggaatccctgcaggaaggtcagcaagtcaaaggtatc
gtcaagaacctcaccgattacggcgcattcgtcgatctgggtggcgtcgatggcctgttg
cacatcaccgacatggcttggaagcgtatcaagcatccttccgaaatcgtcaacgttggc
gacgagatcgatgtcaaggttctgaagtacgatcgcgagcgcaatcgtgtttccctgggc
ctgaagcaactgggcgaagatccatgggttgctatcaaggctcgttacccagaaagcacc
cgcgttaccgctcgtgtaaccaacctgaccgactacggctgcttcgctgagctggaagaa
ggcgtggaaggcctggtacacgtttcggaaatggactggaccaacaagaacatccatcct
tcgaaagtcgtacaagtcggcgacgaagtggaagttatggttctggacatcgacgaagag
cgtcgtcgtatctccctcggcatcaagcagtgcaagtccaacccatgggaagacttctct
ggccagttcaacaagggcgataagatctccggcaccatcaagtcgatcaccgatttcggt
atcttcattggtctggacggcggcatcgacggtctggttcacctgtccgacatctcttgg
aacgaagtgggcgaagaagccgtacgccgtttcaagaagggcgacgagctggacaccgtt
atcctgtcggttgacccagagcgcgagcgtatctccctgggtatcaagcaactggaaagc
gatccgttctccgagtacgtccaagagaacgacaaaggcgcaatcgttaagggtgttgta
aaagaagttgacgccaaaggcgccatcatcaccctggctaacgatatcgaagctactctg
aaagcctccgaaatcagccgtgaccgcatcgaagatgcgcgtaacgttctgaaagaaggc
gaagaagttgaagccaagatcatcagcgttgaccgtaagagccgtgtaatccagctctcg
atcaagtcgaaagacgttgaagacgagaaagaagctatccagagcctgcgcgacaagcca
gctgcttcggatatcgctgctggtcctaccactctgggtgacctgctgcgtgcacaaatg
gaaaagcagaactaa
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