Pseudomonas protegens CHA0: PFLCHA0_c46030
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Entry
PFLCHA0_c46030 CDS
T02671
Name
(GenBank) transcriptional regulator, TetR family
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprc03000
]
PFLCHA0_c46030
Transcription factors [BR:
pprc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PFLCHA0_c46030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
TetR_C_6
TetR_C_41
HTH_22
CecR_C
Motif
Other DBs
NCBI-ProteinID:
AGL86354
UniProt:
A0A2C9ERQ6
LinkDB
All DBs
Position
5196692..5197399
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AA seq
235 aa
AA seq
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MNYTTQCSFYIATGNRRSRLPSVFTDHPDRTQLMTAPKRLTDLKRSAIVQAAISEFRTSG
FEITSMDKIAATAGVSKRTVYNHFPSKEELFAEILHQLWASISAQSEIIYRSDLPLREQL
EKVVRAKLQLLADDNFLDLARVAIAAAIHSPERAQNMVARLGEREEGLTLWIRGALADGR
LKPVDPEFAATQMHGLLKSFAFWPQITMGQAPLATGMQNQVVESALDMFLGRYQA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgaattacactacacagtgtagtttctacattgcaacaggaaacagacgaagtagactg
ccgagtgtttttaccgaccatcctgaccgaacccaacttatgacagccccgaagcgcctc
accgacctcaaacgcagtgccatcgtccaggcggcgatcagtgaatttcgcaccagcggt
ttcgagatcaccagcatggacaagattgccgctacggctggggtgtccaagcgcacggtg
tacaaccacttccccagcaaggaggaactgttcgccgagatcctgcaccagctctgggcc
agcatcagcgcgcaatcggaaatcatctaccgcagcgacctgcccctgcgcgagcagttg
gaaaaggtcgtgcgggccaagctgcaactgctggcggacgacaactttctcgatctggcc
cgggtggccatcgccgcagccattcactcgccggaacgggcgcagaacatggtggcgcgg
cttggcgaacgggaagaaggcctgaccctgtggattcgcggcgccctggccgacggtcgc
ctcaagccggtagacccggaattcgccgcgacccagatgcacggcctgctcaagagcttc
gccttctggccgcagatcaccatgggccaggcgccactggcaacaggcatgcaaaatcag
gtcgtcgagtcggcgctggacatgttcctgggccgctaccaggcctga
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