Pseudomonas protegens CHA0: PFLCHA0_c50380
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Entry
PFLCHA0_c50380 CDS
T02671
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00470
D-Amino acid metabolism
pprc00550
Peptidoglycan biosynthesis
pprc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFLCHA0_c50380 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PFLCHA0_c50380 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pprc01011
]
PFLCHA0_c50380 (murD)
Enzymes [BR:
pprc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PFLCHA0_c50380 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pprc01011
]
Precursor biosynthesis
Amino acid ligase
PFLCHA0_c50380 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AGL86787
UniProt:
A0A2C9ESY5
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Position
complement(5646780..5648126)
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLASRGVAFAVADTRENPPELVTLRRDYPQVEVRCG
ELDVDFLCRADELYVSPGLALATPALQAAAARGVKLSGDIELFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTDQLGAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVFNRQDALTRPLIGEGLPCWTFGLSKPD
FKAFGLREEDGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLAAL
RTFAGLEHRCQWVRDLDGVAYYNDSKATNVGAALAAIEGLGADIEGKIVLIAGGDGKGAD
FKDLRGPVAANCRAVILMGRDSDQIGEAIGDAVPLIRVGSLQEAVEQCRATAQPGDVVLL
SPACASFDMFKNYEDRGHQFVRVVEELA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgagccggggcgttgcctttgcggtggccgatacgcgggaa
aatccacctgagctggtcacgctgcggcgtgactacccgcaggtggaggtgcgttgtggc
gagctggacgtggacttcctgtgccgtgccgacgaactctacgtgagccccggcctggcc
ctggcgaccccggccctgcaggctgctgctgcccgtggggtgaaattgtccggtgatatc
gagctgttcgcgcgtaacgcaaaggcaccgatcgtggcaatcagtggttccaacgccaag
agcaccgtgaccaccctggtgggcgagatggcagcggcggcgggcaagcgcgtggcggtc
ggcggcaacctcgggaccccggccctggacctgctcagcgatgacgtcgagctgtacgtg
atggagctgtccagcttccagctggagaccaccgaccagttgggcgccgaagtggccacc
gtgctcaacatcagcgaagaccacatggaccgttacagcggcctgccggcctaccacctg
gccaagcaccggatcttccgtggtgcccggcaggtggtgttcaaccgccaggacgctctg
acccggccattgatcggtgaaggcctgccatgctggaccttcggcctgagcaagcctgat
ttcaaggccttcggcctgcgcgaagaggacggtgagaagtacctggccttcgagttccag
aacctgatgcccgtgcgcgagctgaagatccgcggcgcccataaccagtccaacgccctg
gcagccttggccctgggtcatgcagtgggcttgccgttcgacgccatgctcgcggcgctg
cgcactttcgccggcctcgagcatcgctgccagtgggttcgcgacctggatggcgtggcg
tactacaacgactccaaggccaccaacgtgggcgccgccctggcggccatcgaaggcctt
ggcgccgacatcgaaggcaagatcgtgctgatcgccggtggtgacggcaagggcgccgac
ttcaaggatctgcgcggcccggtggcggccaactgccgcgcggtgatcctgatggggcgc
gactccgatcagatcggcgaagccatcggtgacgccgtgccgctgattcgtgtcggctcg
ctgcaggaagccgtggagcaatgccgcgccactgcccagcccggtgatgtggtgctgctg
tcgccggcctgcgccagtttcgacatgttcaagaactacgaagaccgtggccaccagttc
gtccgcgttgtggaggaactggcatga
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