Pseudomonas protegens CHA0: PFLCHA0_c54270
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Entry
PFLCHA0_c54270 CDS
T02671
Name
(GenBank) putative 3-methyladenine DNA glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFLCHA0_c54270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprc03400
]
PFLCHA0_c54270
Enzymes [BR:
pprc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PFLCHA0_c54270
DNA repair and recombination proteins [BR:
pprc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFLCHA0_c54270
Prokaryotic type
PFLCHA0_c54270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
DUF6412
PGM_PMM_III
Motif
Other DBs
NCBI-ProteinID:
AGL87165
UniProt:
A0A2C9EU36
LinkDB
All DBs
Position
6046036..6046722
Genome browser
AA seq
228 aa
AA seq
DB search
MSILTSAKLPKALPDGFFDRDAELLARELLGKVIRHKVGDLWLSARIIETEAYYCEEKGS
HASLGYTEKRKALFLDGGHIYMYYARGGDSLNFSARGPGNAVLIKSAYPWVDEVSGPASL
AQMLLNNPDASGRPRPAQKLCAGQTLLCKALGLKVPVWDAKRFDHEILFVEDVGAAVPHI
LQTTRLGIPHGRDEHLMYRFVDAAYAPYCTRNPMRRGQVEGRDYLVLG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgacctctgcaaaactgccaaaagccctgccggacggctttttcgaccgt
gatgccgagcttttggcccgcgaactgttgggcaaagtcatccgccataaagtcggcgat
ctgtggctgtccgcgcgcattatcgaaaccgaagcctattactgcgaggaaaaaggcagc
cacgcctccctcggctacacagaaaagcgtaaggctttgtttctggacggcggccacatc
tatatgtactacgcccgcggcggcgactccctgaacttcagcgcccggggccctggcaat
gccgtactgatcaagtccgcctatccctgggtcgatgaagtctccggccctgccagcctg
gcgcagatgctgctgaacaatccggacgccagtggccggccgcgccccgcgcaaaagctc
tgcgccggccagaccctgctgtgcaaggccctgggcctgaaggttccggtctgggatgcg
aaacgcttcgatcacgagattctcttcgtcgaagatgtgggtgccgccgtgccacacatc
ctccagaccacccgcctgggcatcccccatgggcgtgacgaacacctgatgtatcgcttt
gtcgatgccgcctacgccccctactgcacgcgcaaccctatgcgtcgcggccaggtcgaa
gggcgcgactacctggtgctcggctga
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