Pseudomonas protegens CHA0: PFLCHA0_c55990
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Entry
PFLCHA0_c55990 CDS
T02671
Symbol
lptD
Name
(GenBank) LPS-assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprc02000
]
PFLCHA0_c55990 (lptD)
Transporters [BR:
pprc02000
]
Other transporters
Pores ion channels [TC:
1
]
PFLCHA0_c55990 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
LptD_N
OstA_2
LptC
Motif
Other DBs
NCBI-ProteinID:
AGL87328
UniProt:
A0A2C9EV18
LinkDB
All DBs
Position
6223290..6226127
Genome browser
AA seq
945 aa
AA seq
DB search
MALKSPAFRKKFPLLVTGSLLALQPLATSFVVAAEQYDCSVSASGGWACAPKTSAAQLPP
RPVHDANSVSSSVATAADATGEEASGDKSKLVTEAKGRGLKSRSADYSHLDWVPREKLTA
AQLAETGPYCSGSYIEPIRPGMNDKTNKSDAPTFIGAKASRYQQEEQVATLAGDVVMRQG
SMQVEADEASLYQAENRGELSGNVRVRDNGALLVGDHADIQLDTGEAKVDNAEYVLHKSR
VRGNALYAKRAENAIIRLKDGTYTTCEPNSNAWQLKGNNITLNPATGFGTATNVTLRVKD
IPVLYTPYIYFPIDDRRQSGFLPPSFSTGSDTGFMLVTPYYFNLAPNYDATLYPRYMAKR
GLLMEGEFRYLTKSSEGQFGAAYLNDDDTDRKKQTDYEKTRYMLNWQHKGGLDSRLMTEV
DYTKISDPYYFQDLQTDQIGVKSTDYVNQQGAVTYRGDSYTARLNVQAYELASVSNITPY
NKLPQITFNGALPYHPQGLDFTYETELVRFDRDLLTGNYTDKDGGPIDPVTGAVGTRRLD
TNVAGLARANGDRLNLKPGVSLPLNWSYGYLTPSLKYMYTQYNLDLDGTGKEGIVAARNY
ATATGTRYVGGDYSRNQNRGVPIASLDGGLYFDRNTQWFGKNYRQTLEPRAFYLYVPEED
QKDIPVFDTGEPTFNYASLFRDNRFSGSDRVGDENKLSLGVTSRWIEDNGFQRQRISVGQ
ALYFKDRTVQLPGIDYRTRADATSNVSPYALEYEYRYNRDWRATADYNWDPDSHSPRSGS
AMFHYQPEDNPNKVVNAGYRYRNDQIRYDQNSGTWKMGGDYGTPGQPGYVKDYYKIQQHD
FSVIWPIVPQWNAISRWQYDYNRNRTLEAFGGFEYDNCCWKLRLISRYWVKYDEFSQNAP
ENEKGDRGIFLQIVLKGLGGVMGTKVESFLDKGIQGYREREDQAF
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaaatcccccgcgtttcgtaaaaaatttccgttgctggttaccggcagtttg
ctggccctgcaacctctagccacttccttcgtggtcgccgcggaacagtatgactgctca
gtctctgcttcgggtggctgggcctgtgcgccgaaaaccagcgccgcccaactgccgccg
cgcccggtccacgacgccaactcggtcagctccagcgttgccacggcagccgatgctacg
ggcgaagaagccagcggcgacaagtcgaagctggtgaccgaggccaagggccgtggcctg
aagtcccgcagtgcggactacagccacctcgactgggtaccgcgtgagaagctcaccgcc
gctcaattggccgagaccggtccttactgctctggttcctatatcgaaccgattcgtcct
ggcatgaatgacaagacgaataaaagtgacgctccgacctttatcggcgccaaggcttcc
cgctatcagcaggaagaacaggtggcgaccctggccggtgacgtggtcatgcgccagggc
agcatgcaggtcgaggccgacgaggccagcctgtatcaggccgagaaccgcggcgaacta
agcggcaacgtgcgcgtacgcgacaatggcgcgctgctggtgggcgaccacgccgacatc
cagctggataccggtgaagccaaggtcgacaacgccgagtacgtactgcacaaatcccgc
gtccgcggtaatgcgctgtacgccaagcgtgcggaaaacgccatcatccgcctcaaggat
ggtacgtacaccacgtgcgagccgaacagcaacgcctggcagctcaagggcaacaacatc
accttgaacccggccaccggcttcggtaccgcgaccaacgtgacccttcgggtcaaagat
attccggtgctctacaccccgtatatctacttcccgatcgacgatcgtcgccagtccggc
ttcctgccgcctagcttcagtaccggcagcgataccggcttcatgctggtgaccccgtac
tacttcaacctggcgcccaactacgacgccacgttgtacccacgctacatggccaagcgc
ggcctgttgatggaaggcgagttccgctacctgaccaagagcagcgaaggtcagttcggc
gcggcctacctcaacgacgacgacaccgatcgcaagaagcagaccgactacgaaaaaacc
cgctacatgctcaactggcagcacaagggcgggcttgattcgcgtctgatgaccgaagtc
gactacaccaagatcagcgatccgtactacttccaggatctgcagaccgaccagatcggc
gtgaagtccaccgattacgtcaaccagcaaggtgccgtgacctaccgtggcgacagctac
accgcacgcctgaacgtacaggcgtacgagctggccagcgtgtccaacatcactccgtac
aacaagctgccgcaaatcaccttcaacggcgcgctgccgtaccatccgcaaggcctggat
ttcacttatgaaaccgagttggtgcgcttcgatcgggatctgctgacaggcaattatacg
gacaaggacggtgggccgatcgatccggttaccggtgcagtgggcacgcgacgcctggat
accaacgtcgctgggctagcccgcgcgaatggcgatcgtctgaacctcaagccgggcgtc
agcctgccgctgaactggagctacggctacctgacgccgtccttgaagtacatgtacacc
caatacaaccttgatcttgatggtactggcaaagaaggcatcgtcgcggcacgcaactac
gcgaccgctacaggcacccgctatgtcggcggcgactacagccgaaaccaaaaccgcggc
gtcccgatcgccagcctcgacggtggcctgtacttcgaccgcaacacccaatggtttggc
aagaactatcgtcaaaccctggaaccacgcgcgttctacctctacgttcctgaagaggat
cagaaagacatcccggtattcgatactggcgagcccacgttcaactacgcctccttgttc
cgcgacaaccgcttttccggctctgaccgtgtcggcgacgagaacaagctgtccttgggt
gtgaccagccgctggatcgaagacaacggtttccaacgccagcgcatcagcgtcggccag
gctctgtacttcaaggaccgtaccgtccagctcccgggcatcgattaccgtacccgcgcg
gacgccacctcgaacgtctcgccttacgcacttgagtacgaataccgctacaaccgcgac
tggcgtgcaactgccgactacaactgggacccggacagccacagcccgcgttccggtagt
gcgatgttccactatcagcctgaagacaacccgaacaaggtggtcaacgccggctatcgc
tatcgcaacgaccagattcgctacgaccagaacagcggtacctggaaaatgggtggcgac
tacggcactccaggccagcctggctacgtgaaggactactacaagatccagcagcatgac
ttctcggtgatctggccgatcgtgccgcaatggaacgccatcagccgttggcagtacgac
tacaaccgtaaccgcacgctcgaggccttcggtggtttcgaatacgacaactgctgctgg
aaactgcgcctgatcagccgttactgggtcaagtatgacgagttcagtcagaacgctccg
gagaacgaaaaaggcgaccgcggcatcttcctccaaattgttctgaagggtctcggtggc
gtcatgggcaccaaagtagagagcttcctcgacaaaggcatccaaggttatcgtgaacgt
gaagaccaagctttctga
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