Pseudomonas protegens CHA0: PFLCHA0_c58540
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Entry
PFLCHA0_c58540 CDS
T02671
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase RppH
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFLCHA0_c58540 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprc03019
]
PFLCHA0_c58540 (rppH)
Messenger RNA biogenesis [BR:
pprc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PFLCHA0_c58540 (rppH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
AGL87582
UniProt:
A0A2C9EV87
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All DBs
Position
complement(6504693..6505172)
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AA seq
159 aa
AA seq
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MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
EREDVQILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLISNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLVRD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggtttccgccccaatgtcgggatcattctgaccaatgatgccgga
caggtgctatgggctcgccgtatcaatcaagatgcctggcagtttcctcaagggggaatc
aaccccgatgagacgccggaagacgccttgtatcgcgagctgaacgaagaagtggggctg
gagcgcgaagatgtgcaaattctcgcctgcacccggggctggttgcgctatcgtttgccg
cagcgtctggtccggacccacagccaaccgctgtgcattggccagaagcagaaatggttt
ctcctgcgcctgatctccaacgagcagcgggtgcggatggatttgaccggtaaaccggag
ttcgatggctggcgctgggtcagttattggtatccgttgggccaggtggtgacattcaag
cgcgaagtgtatcgccgcgctctcaaagagcttgccccgcgcctgctagtgcgcgactga
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