Pseudomonas protegens CHA0: PFLCHA0_c59730
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Entry
PFLCHA0_c59730 CDS
T02671
Symbol
dapF2
Name
(GenBank) diaminopimelate epimerase DapF
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00300
Lysine biosynthesis
pprc00470
D-Amino acid metabolism
pprc01100
Metabolic pathways
pprc01110
Biosynthesis of secondary metabolites
pprc01120
Microbial metabolism in diverse environments
pprc01230
Biosynthesis of amino acids
Module
pprc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFLCHA0_c59730 (dapF2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFLCHA0_c59730 (dapF2)
Enzymes [BR:
pprc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PFLCHA0_c59730 (dapF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
DUF8756
Motif
Other DBs
NCBI-ProteinID:
AGL87701
UniProt:
A0A2C9EVV6
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All DBs
Position
6626938..6627768
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRNTGIGFDQLLIVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKRQIRVETKSGVIELDIRNDGQISVNM
GAPRLVPADIPFQAPAQADSYTLDVDGRQVQLAAVSMGNPHAVLRVDDINSAPVHELGPK
IEHHPRFPARVNVGFLQVLDRQRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcgttttaccaagatgcacggcctgggcaatgacttcatggttctcgacctg
gtcagccagcacgcgcatattctgcccaagcacgccaaacaatggggtgatcgcaatacc
gggattggcttcgatcagttgctgatcgtcgaggccccgagcaacccggatgtggatttc
cgctaccggatcttcaactccgacggctccgaagtggaacagtgcggcaatggtgcacgc
tgctttgcccgcttcgtgctggacaagcgcctgaccaccaagcgccagatccgcgtcgag
accaagagcggcgtgatcgagctggatatccgcaacgacggccagatcagcgtcaacatg
ggcgcgccgcgcctggtaccggcggacattccgttccaggcgccggcccaggccgacagc
tacaccctggacgtcgatggccgccaggtgcagttggccgcggtgtccatgggcaacccc
cacgccgtgttgcgggtggatgacatcaacagcgcgccggtgcacgagctgggtccgaag
atcgaacaccacccgcgcttcccggcgcgggtcaacgtcggttttctccaggtcctggac
cgccagcgcgcgcaactgcgggtctgggaacgcggcgccggggaaacccaggcctgcggc
accggtgcctgcgctgctgctgtggccgcgatcagccaggggtggatggattcgccccta
ttgatcgacctgccgggcgggcgcctgtccattgaatgggcaggccctggccaaccggtg
atgatgaccggcccggcagtgcgcgtatacgaaggacaggtgcgtctttaa
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