Pseudomonas protegens CHA0: PFLCHA0_c60160
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Entry
PFLCHA0_c60160 CDS
T02671
Symbol
exoA
Name
(GenBank) exodeoxyribonuclease ExoA
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFLCHA0_c60160 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprc03400
]
PFLCHA0_c60160 (exoA)
Enzymes [BR:
pprc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PFLCHA0_c60160 (exoA)
DNA repair and recombination proteins [BR:
pprc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PFLCHA0_c60160 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
AGL87744
UniProt:
A0A2C9EVQ2
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All DBs
Position
6672774..6673553
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtggagcgtggtttgctc
agttggctgcaggcacagaatgccgacgtcatctgcctgcaggacacccgcgcctctgcc
tttgaactggacgacccagccttccaactggatggctacttcctttatgcctgcgatgcc
gaagtccctgcccaaggcggtgtggctttgtattcgcggttgcagccgaaggcggtcatc
agcggcctcggcttcgagacagccgatcgttacgggcgctacctgcaagccgatttcgac
aaggtcagcatcgcgaccttgctgcttccatcagggcagaacggcgatgaagacttgaac
cagaagttcaagctaatggacgatttcgcccgttatctggataaacagcggcgcaaacgt
cgcgagtacatttattgtggctcgctgtacgtggcgcaacagaagctggatatcaagaac
tggcgcgacagccagcaatctccgggcttcctggcacctgaacgtgcctggatggacgag
atcattggcaacatgggttatgtcgacgcattgcgtgaagtcagccgtgaaggcgaccag
tacagctggtggccggacaacgaacaggccgagatgctgaacctgggctggcgtttcgac
taccagttgctgactcccggcctgcgtcgctttgtccgcagcgctcgcctgccgcgccag
ccacgcttctcgcagcacgcaccgctgatcgtggactatgactggacgctgaccatctaa
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