Pseudomonas protegens CHA0: PFLCHA0_c60420
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Entry
PFLCHA0_c60420 CDS
T02671
Name
(GenBank) hypothetical protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFLCHA0_c60420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pprc02044
]
PFLCHA0_c60420
Secretion system [BR:
pprc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFLCHA0_c60420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AGL87770
UniProt:
A0A2C9EVT4
LinkDB
All DBs
Position
complement(6702816..6704150)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSTGAWGFSELRIDQGLLAQGKL
AIVSARGLLPDGTPFNIPHDDLAPSPLCIDDNLRDGLVYLALPLKRAGARDTVDEGEELG
GARYLSQVREVRDDNAPFENRAPVAVGSRALRLLTAQDGLSDYAAIGVVRVKEKRADRAL
VLDDSYIPPVLDVAASKPLSAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLVNHLSQISPLHPERLFSELVSLAGEFSTFTHSARRPEQYPQYQHDELAMSFAP
VMQALREALSMLIDSKATPIPIVEKAYGVHVAMLADRTLLENASFILVVRADVPGETLRG
RFAQQSKVGSVEHIRDLVNLQLPGIGLLPLPVAPRQLPYHAGSTYYELDRGSEHWKQLVH
SGGFAFHVAGEFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcattggaacccagcacttc
cagcagcatgaccgttacctggaaaacctcatcgacgcccgcagccgcccgctgtcgacg
ggagcctgggggttctccgagctgcgtatcgatcagggcctgctggcccagggcaagctg
gccatcgtcagcgcccgtggcctgctgcctgacggcacgccgttcaacattccccatgac
gacctggcgcccagcccgttgtgcatcgacgacaacctgcgtgacggcctggtgtacctg
gcgctgcccctcaagcgcgccggcgcccgggacaccgtggacgagggcgaagagctgggc
ggtgcccgctacctgagccaggtgcgcgaggtgcgtgacgacaacgcaccgttcgagaac
cgcgcgccggtggccgtgggctctcgggccctgcgcctgctcaccgcccaggacggcctc
agcgactacgccgccattggcgtggtgcgggtcaaggagaaacgcgccgaccgtgctctg
gtgctggacgacagctacattccgccggtgctggacgtggccgcgtccaagccgttgagc
gcctttcgcagcgagctgctgggcctgctgcaccagcgcggcgaggccctggccgggcgc
gtggtggcatcgggcgcggggggcgcttcggaaatcgccgacttcatgctcctgcaactg
gtgaaccgcgcccagcccctggtcaaccacctgagccagatcagcccgctgcaccccgag
cgcctgttcagcgagctggtgagcctggccggcgagttctcgaccttcacccacagcgcc
cggcgccctgagcaatacccgcagtaccagcacgatgagctggccatgagtttcgccccg
gtgatgcaggccctgcgtgaagcgctgtcgatgctgatcgacagcaaggcaacgccgatc
cccatcgtcgagaaagcctacggcgtacacgtggcgatgctggccgaccgcaccctgctg
gagaacgccagcttcatcctggtggtgcgtgccgacgtgccgggcgaaaccctgcgcggg
cgctttgcccagcagagcaaggtgggttcggtggagcacatccgcgacctggtcaacctg
cagctgccgggcatcggcctgctgccgctgccggtggcgccgcggcaactgccgtaccac
gcaggctcgacctactacgagctggaccgtggcagcgagcactggaaacaactggttcac
tccggcggcttcgcgttccacgtcgcgggagaattcccgggcttgaacctggccttctgg
gccattcgaggataa
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