Pseudomonas protegens CHA0: PFLCHA0_c60480
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Entry
PFLCHA0_c60480 CDS
T02671
Symbol
hcp
Name
(GenBank) protein Hcp
KO
K11903
type VI secretion system secreted protein Hcp
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02025
Biofilm formation - Pseudomonas aeruginosa
pprc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PFLCHA0_c60480 (hcp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFLCHA0_c60480 (hcp)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pprc02044
]
PFLCHA0_c60480 (hcp)
Secretion system [BR:
pprc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFLCHA0_c60480 (hcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_HCP
Motif
Other DBs
NCBI-ProteinID:
AGL87776
UniProt:
A0A2C9EVR8
LinkDB
All DBs
Position
6709859..6710347
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AA seq
162 aa
AA seq
DB search
MAVDIFIKIGDIKGESMDKAHKDEIDVLNWSWGMSQSGNMHVGGGGGAGKVNIQDLSLTK
YVDKASPNLMMHCSSGKHIDKVRLTVRKAGGESQVEYMIIDLEEVLITSLSTGGSGSDDR
LTENITLNFAQVMVEYQPQKADGTKDGGPIKYGWNIRSNTKR
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgatattttcatcaagatcggtgacatcaagggcgagtccatggacaaagcc
cacaaggacgaaatcgacgtgttgaactggagctggggcatgtcccagtccggcaacatg
cacgttggcggtggcggcggcgcgggcaaggtgaacatccaggacctgtcgctgaccaag
tacgtggacaaggcatcgccgaacctgatgatgcattgctccagcggcaagcacatcgac
aaggtgcgcctgaccgtgcgcaaggccggcggcgaaagccaggtcgagtacatgatcatc
gacctggaagaagtgctgatcacttcgctgagcaccggcggttcgggcagcgatgaccgc
ctgaccgaaaacatcaccctgaacttcgctcaggtgatggtcgagtaccagccgcagaaa
gccgacggcaccaaggacggcggcccgatcaagtacggctggaacatccgctccaacacc
aagcgctga
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