Pseudomonas protegens CHA0: PFLCHA0_c60510
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Entry
PFLCHA0_c60510 CDS
T02671
Name
(GenBank) hypothetical protein
KO
K11895
type VI secretion system protein ImpH
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFLCHA0_c60510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pprc02044
]
PFLCHA0_c60510
Secretion system [BR:
pprc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFLCHA0_c60510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_TssG
PRKCH_uORF2
Motif
Other DBs
NCBI-ProteinID:
AGL87779
UniProt:
A0A2C9EVZ6
LinkDB
All DBs
Position
6712894..6713895
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AA seq
333 aa
AA seq
DB search
MHAEPWEYDFFQALRRIECLSPQLPRFGHSVRLADDPLRLGQQADCSFAPATLASVTPGS
DGAATRLEQFFFGLGGPNGPLPLHITEYVRERQRNNADSTSKRFLDVFHHRLLSLFYRAW
AEARPTVSHDRPDDDYWSARLAALSGRGMPSLLKQGLIADTAKLHYSGHLAAQTRYPDGL
RAIISEYFGLPVQIEEYVGQWLELPERSRVGVQSHQLGVDFCLGSHVWDRQHKFRIRLGP
MKLDDYLGMLPDGQQFQELVAWAAEYLGFELDWDLNLVLLKDEVPKLQLNGRQRLGFNTW
LGQPGSDAKDLILARHYADLATTSRTPRSTEHG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccgagccttgggagtacgacttcttccaggccctgcggcgtatcgaatgcctg
tcgccgcaactgccgcgcttcggtcactccgtgcgcctggcggacgatccgctgcgcctg
ggacagcaggccgactgcagcttcgccccggccaccctggcctcggtcacccccggcagc
gacggcgccgcgacccgcctggagcagttcttcttcggcctcggcgggcccaacgggccg
ttgccgctgcacatcaccgaatacgtgcgcgagcgccagcgcaacaacgccgacagcacc
agcaagcgctttctcgatgtgttccaccaccgcctgctgagcctgttctatcgggcctgg
gccgaagcccgaccgacggtgagccacgatcgcccggacgacgactactggtcggcgcgg
ctggcggcgctgtcgggccggggcatgcccagcctgctcaagcagggtctgatagccgac
accgccaagctgcattacagcggccacctggcggcccagacccgctacccggacggcttg
cgggcgatcatcagcgagtatttcggcctgccggtgcagatcgaggaatatgtcggccag
tggctggagttgcccgaacgcagccgggtcggggtgcaatcccatcagctgggggtggat
ttctgcctgggcagccacgtctgggaccgccagcacaagttccgcatccgcctcggcccg
atgaaactggacgactacctggggatgctgcccgacggccagcaattccaggaactggtg
gcctgggccgccgaatacctgggcttcgagctggactgggacctgaacctggtcctgctc
aaggacgaagtgcccaagctgcaactcaacggccgccagcgcctgggtttcaacacctgg
ctcggccaacccggcagcgatgccaaggatctaatactggcccggcactacgccgacctg
gccactacctcacgtacaccaaggagcacagagcatgggtga
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