Pseudomonas protegens CHA0: PFLCHA0_c60520
Help
Entry
PFLCHA0_c60520 CDS
T02671
Symbol
clpV
Name
(GenBank) protein ClpV
KO
K11907
type VI secretion system protein VasG
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc02025
Biofilm formation - Pseudomonas aeruginosa
pprc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PFLCHA0_c60520 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PFLCHA0_c60520 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pprc02044
]
PFLCHA0_c60520 (clpV)
Secretion system [BR:
pprc02044
]
Type VI secretion system
Imp/Vas secretion system core components
PFLCHA0_c60520 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Zeta_toxin
Sigma54_activat
TniB
AAA_25
nSTAND3
AAA_7
ATPase_2
AAA_14
AAA_18
NACHT
Torsin
Hpr_kinase_C
SRP54
CbiA
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
AGL87780
UniProt:
A0A2C9EVU5
LinkDB
All DBs
Position
6713888..6716563
Genome browser
AA seq
891 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLTDSDLHRIIRQF
NLEPARLAKDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVIG
ILKTPSLRHALLGLSREFDKIKVETLCERFDEYIGDSPENALSASDGFSAGAVPGEASGA
MAPSALGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVVGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEQHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREQAIGVAIGNRQVNSENL
LTAERERLAELESRWAQEKTLVDELLATRAQLRENVGLVDSDVGDDSHGLREKLVDLQQR
LSTLQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHA
LQMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSE
FQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDK
GVMEDGEGRMIDFKNTLILLTTNAGTELIANVCKNPQAVPEPEEIAKALRQPLLEIFPPA
LLGRLVTIPYYPLSDEMLKAITRLQLGRIKKRVESTHKVDFDFDDEVIDLIVSRCTETES
GGRMIDAILTNSLLPDMSREFLNRMLEGRALAGVRISQRDNELHYDFSEPA
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgcggcgctgttcggcaaactcaacagcgttgcctacaaagcc
atcgaagccgccacggtcttctgcaaattgcggggcaacccctatgtggaactggcccac
tggtttcaccagttgctgcaacttacggactcggacctgcaccgcatcatccgccagttc
aacctggagccggcgcgcctggccaaggacctgaccgaggccctggaccgcctgccccgg
ggctcgacctcgatcaccgacctgtcgtcccacgtcgaggaggcggtggagcgcggttgg
gtctacggcagcctgatgttcggcgaaagccaggtgcgcaccggctacctggtgatcggc
atcctcaagaccccgagcctgcgccatgcgttgctggggctgtcccgcgagttcgacaag
atcaaggtcgagaccctgtgcgagcgctttgacgaatacatcggcgactcgccggaaaac
gccctgagcgccagcgacggcttcagtgccggtgcggtgcccggcgaagccagcggcgcc
atggcccccagcgccctgggcaagcaggaagccctcaagcgcttcaccgtcgacctcacc
gaacaggcccgcagcggcaagctcgaccccattgtcggccgtgacgaagagatccgccaa
ctggtggacatcctcatgcgccgccggcagaacaacccgatcctcaccggtgaagccggg
gtgggcaagaccgcggtggtggaaggtttcgccctgcgcatcgtcgtcggcgacgtgccg
ccggcgctcaaggacgttgaactgcgcagcctcgacgtcggcctgctgcaggccggcgcc
agcatgaagggcgagttcgaacagcgcctgcgccaggtcatcgaggacgtccaggcctcg
cccaagccgatcatcctgttcatcgacgaagcccacaccctggtgggcgccggtggcgcc
gccggcaccggcgacgcggccaacctgctcaagccggctctggcccgtggcaccctgcgc
accgtggccgccaccacctgggccgagtacaagaagcacatcgagaaagacccggccctg
acccggcgcttccaggtggtgcaagtagccgaaccttcggaagacaaggcgctgctgatg
atgcgcggcgtggcctcgaccatggaacagcaccatcaggtgcagatcctcgacgaagcc
ctggaggcctcggtcaaactgtcccatcgctacattcccgcgcgccagttgccggataaa
tccgtcagcctgctggataccgcttgcgcccgcgtcgccatcagcctgcacgccgtgccg
gccgaggtggacgatagccgccggcgcatcgaggccctggaaaccgagctgcagatcatc
gcccgggaacaggcgatcggcgttgccattggcaaccgccaggtcaacagcgagaacctc
ctgactgccgagcgcgagcgcctggccgagctggaaagtcgctgggcacaagagaagacc
ctggtggacgaactgctggcaacccgcgcccaattgcgggaaaacgtcggcctggtggac
agcgacgtcggcgacgacagccacggcctgcgggaaaaactggtggacctgcaacagcgc
ctcagcaccctgcaaggcgagaccccgctgatcctgccgaccgtggactaccaggccgtg
gcctcggtggtcgccgactggaccggcattccagtggggcgcatggcccgcaacgagctg
gaaaccgtgctcaacctggaccagcacctgaagaaacgcatcatcggccaggaccacgcc
ctgcagatgatcgccaagcgcatccagacctcccgcgcaggcctcgacaacccgaacaag
ccgattggcgtgttcatgctggccggcacttccggggtgggcaagaccgaaaccgccctg
gccctggccgaagccatgtatggcggtgagcagaacgtcatcaccatcaacatgagcgag
ttccaggaagcccacaccgtgtccaccctcaagggcgccccgccgggctatgtcggctac
ggcgaaggtggcgtgctcaccgaagcggtacggcgcaagccctacagcgtggtgctgctg
gacgaagtggaaaaggcccacccggacgtgcacgagatcttcttccaggtattcgacaag
ggcgtcatggaagacggcgaaggccgcatgatcgacttcaagaacaccctgatcctgctc
accaccaacgccggcaccgagctgatcgccaacgtctgcaagaacccgcaggcggtgccc
gagccggaggaaatcgccaaggccctgcgccagccactgctggagatcttcccgccggca
ctgctggggcgcctggtgaccattccctactacccgctgagcgacgagatgctcaaggcc
atcacccgcctgcaactggggcggatcaagaagcgcgtggaaagcacccacaaggtggat
ttcgatttcgacgacgaggtcatcgacctgatcgtctcgcgctgcaccgagaccgaaagc
ggcgggcggatgatcgacgccatcctgaccaacagcctgctgccggacatgagccgcgag
ttcctcaaccgcatgctcgaaggccgcgccctggccggggtgcgcatcagccagcgcgac
aacgaactgcactacgacttcagcgagccggcctga
DBGET
integrated database retrieval system
