Pseudomonas protegens CHA0: PFLCHA0_c60880
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Entry
PFLCHA0_c60880 CDS
T02671
Symbol
qseD
Name
(GenBank) HTH-type transcriptional regulator QseD
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprc03000
]
PFLCHA0_c60880 (qseD)
Transcription factors [BR:
pprc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFLCHA0_c60880 (qseD)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_39
Motif
Other DBs
NCBI-ProteinID:
AGL87816
UniProt:
A0A2C9EVV2
LinkDB
All DBs
Position
complement(6750508..6751446)
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AA seq
312 aa
AA seq
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MVRVREDVMNLESKWLEDFSALAATRSFSQAAERRFVTQPAFSRRIRSLEAALGLTLVNR
SRTPVELTAAGQLFLVTARTVVEQLGEVVRHLHHLEGGQGEVMQVAAAHSLALGFFPRWI
AQLRNEGLNIATRLVATNVGDAVHALREGGCDLMLAFYDPDAALQMDSEIFPSLHLGHTE
MLPVCAADAQGKPLFDLEGEASVPLLAYSAGAFLGRSVNLLLRQRNLRFTTVYETAMADS
LKSMALEGLGIAWVPQLSVRAELARGELVVCGGAQWHVPLEIRLYRCALVRKANVRLLWR
KLEGAAAQAAAT
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgtccgggaggacgtgatgaatctggaaagcaaatggctcgaggacttcagt
gccctggccgccacccgcagcttttcccaggctgccgagcgacgtttcgtgacccagccg
gccttcagccggcgcatccgcagcctggaagcggccctgggcctgaccctggtcaaccgc
tcgcgcacgccggtggagctgacggcagcggggcagttgttcctggtgaccgcgcgcacc
gtggtcgaacagctcggcgaggtggtgcgtcacctgcaccacctggaaggcgggcagggc
gaggtgatgcaggtggcggcggcccactccctggcgctgggtttcttcccgcgctggatc
gcccaactgcgcaacgaagggctgaacatcgccacgcggctggtggccaccaacgtcggt
gatgcggtgcacgccctgcgcgaaggcggttgcgacctgatgctggccttctatgacccg
gacgcagccttgcagatggactcggaaatcttcccctcgctgcacctggggcacaccgag
atgctcccggtgtgcgccgccgatgcccagggcaagccgctgttcgacctggaaggcgag
gccagcgtgccgttgctggcgtacagcgccggggctttcctcgggcgttcggtgaacctg
ctgctgcgccagcgcaacctgcgtttcaccaccgtctatgaaaccgccatggccgacagc
ctcaagagcatggccctggaaggcctgggcattgcctgggtgccgcaactgagcgtgcgc
gccgagctggcccggggcgagctggtggtgtgcggcggggcgcaatggcatgtgccgctg
gagattcgcctgtaccgctgcgccctggtgcgcaaggccaacgtacgcttgctgtggcgc
aagctggaaggcgctgccgcgcaagctgcggccacgtag
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