Pseudomonas protegens CHA0: PFLCHA0_c61230
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Entry
PFLCHA0_c61230 CDS
T02671
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc03420
Nucleotide excision repair
pprc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PFLCHA0_c61230 (uvrD)
03430 Mismatch repair
PFLCHA0_c61230 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprc03400
]
PFLCHA0_c61230 (uvrD)
Enzymes [BR:
pprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PFLCHA0_c61230 (uvrD)
DNA repair and recombination proteins [BR:
pprc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PFLCHA0_c61230 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PFLCHA0_c61230 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Viral_helicase1
RHH_1
Motif
Other DBs
NCBI-ProteinID:
AGL87851
UniProt:
A0A2C9EWA8
LinkDB
All DBs
Position
6792393..6794576
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLSQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRGIYEAYE
AACQRAGVIDFSELLLRALDLWRDHPGLLAHYQKRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSADFPDTEVIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHSDVSMWEAMRQLVANKGLTGRAAGALGAFIELIENLAAKTLEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARNFENTEEDEDLTPLAAFLGHA
SLEAGDTQADEHEDSVQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
SQSTSSLFGGSEIPDTGLSLGQAVRHSVFGDGVILNFEGAGAQARVQVNFSEGSKWLMLG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctccctcctgttgaactccctcaacgacgcccaacgccaggccgta
gccgcctccgtgggtcgtcagttggtcctggccggtgctggctccggcaaaacccgtgtg
ctggtgcaccgtatcgcctggttgatccaggtcgagaacgcctcaccccactcgatcctg
tcggtgaccttcaccaacaaggccgcagccgagatgcgccaccgcatcgaacaactgctg
ggcatcaacccggcaggcatgtgggtcggcaccttccacggcctggcccaccgcctgctg
cgggcccactggcaggaagcggggctgagccagaccttccagatcctcgacagcgacgac
cagcaacgcctggtcaagcgggtgatccgcgagctgggcctggacgaacagcgctggccg
gcccgccaggcccagtggttcatcaacgggcagaaggacgaaggcctgcgcccgcaacat
atccaggccagcggcgacctgttcctggccaccatgcgcggcatctatgaggcctacgag
gccgcttgccagcgtgccggggtcatcgacttctccgaactgctgctgcgcgccctggac
ctgtggcgcgaccacccgggtttgctggcgcactaccagaagcgtttccgccacgtgttg
gtggacgagttccaggacaccaacgccgtgcaatacgcctggctgcggttgctggcccag
ggtggcgacagcctgatggtggtgggcgacgacgaccagtcgatctatggctggcgcggg
gcgaaaatcgagaacatccaccagtactccgccgacttcccggacaccgaagtgatccgc
ctggagcagaactaccgctctactgccggcatcctcaaggctgccaacgccctgatcgcc
aacaacaccgggcgcctgggcaaggagctgtggaccgacggcggcgacggtgaagccatc
aacctgtatgccgccttcaacgagcacgatgaagcccgctatgtagtggaaaccatcgag
agcgcgctgaagaccggcctggcccgcagcgacatcgccattctctaccgctccaacgcc
cagtcccgggtgctggaagaagccttgctgcgcgaacgcattccgtaccgcatctatggc
ggccagcgcttcttcgagcgggcggaaatcaagaacgccatggcttacctgcgcctcctg
gaaggccgtggcaacgacgcagccctggaacgggtgatcaacgtgccagcccggggcatc
ggcgagaagaccgtcgaagccatccgcgagcatgcgcgccacagcgatgtatcgatgtgg
gaagccatgcgccagctggtggccaataaaggcctgaccgggcgcgctgcaggtgcgctg
ggggcctttatcgaactgatcgaaaacctcgccgccaagaccctggaaatgcccctgcac
ctgatgacccagaccgtcatcgagcagtcggggctgattgcctaccacgaagcggaaaaa
ggcgaaaaaggccaggcccgggtggaaaacctcgaggaactggtgagcgccgcgcgcaac
ttcgagaacaccgaagaggacgaagacctgacgcccctggcggcattcctcggccacgct
tccctggaagccggcgatacccaggccgacgagcatgaagacagcgtgcaactgatgacc
ctgcacagcgccaagggtctggagttcccctacgtgttcctggtgggcatggaagaaggc
ctgttcccccacaagatgagcctggaagaacccggccgccttgaggaagaacgccggctg
gcgtatgtgggcattacccgggccatgcagaacctggtaatgacctacgcggaaacccga
cgcctgtacggcagcgaaacctacaacaaggtgtcgcgtttcgtgcgcgaggtgcccaag
gggctgattcaggaagtgcggctgtccaacagcgtcagccggcctttcggcggcggccag
tcacaaagtaccagcagcctgttcggcggcagcgaaatcccggacaccggcctgagcctc
ggccaggcggtacggcactcggtgttcggcgacggggtgatcctcaatttcgagggcgcc
ggcgcccaggcccgggtccaggtcaacttcagcgaaggcagcaagtggctgatgctcggc
tatgccaagctggaagccatctaa
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