Pseudomonas promysalinigenes: HU725_000015
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Entry
HU725_000015 CDS
T07662
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HU725_000015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprg03400
]
HU725_000015 (recF)
DNA repair and recombination proteins [BR:
pprg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HU725_000015 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_16
AAA_15
AAA_13
AAA_29
AAA_27
Aq_aa27
DUF7432
Motif
Other DBs
NCBI-ProteinID:
QXI33804
LinkDB
All DBs
Position
2699..3802
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AA seq
367 aa
AA seq
DB search
MSLRRIMVTAVRNLHPVTLSPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLNPV
IQYEQAACTVFGEVQLAEGGTSNLGVSRERAGEFTIRIDGQNAKSAAQLAELLPLQLINP
DSFRLLEGAPKIRRQFLDWGVFHVEPRFLPAWQRLQKALRQRNSWLRHGTLDPASQAAWD
RELCLASAEIDEYRRNYIKALKPVFEQTLSELVELDGLTLSYYRGWDKDRELQEVLASSL
LRDQQMGHTQAGPQRADLRLRLAANNAADILSRGQQKLVVCALRIAQGHLVNQARRGHCI
YLVDDLPSELDDQHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVAMFHVEHGRIT
QTHDHRE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcgacggatcatggtcaccgcggtgcgcaacctgcacccggtgacactctca
ccttccccccgcatcaatatcctttacggcgccaatggcagcggcaagaccagtgtgctt
gaagctgtgcacctgcttgggcttgcacgttcattccgcagtacccggttgaaccctgta
attcagtacgagcaggcggcttgtacagtgtttggcgaggtgcagttggctgaagggggc
accagcaatttgggcgtctctagggagcgggcgggcgaatttaccatcaggattgacgga
cagaatgccaagagcgctgctcagctggcagagttgttaccgctgcagttgatcaaccca
gatagtttcagattactggaaggcgctccgaaaattcgccggcagtttctagattgggga
gtgttccacgtggaacctcgttttcttccggcttggcagcgcctgcagaaggcactgcgg
cagcggaactcgtggttgcggcatggtacacttgacccagcttcgcaagccgcctgggac
cgggaattatgcctggccagcgcagaaatagatgaataccgtcgcaactacatcaaggcc
ttgaagcctgtcttcgagcaaaccctgagtgagctggtcgagctggacgggttgaccctg
agctactacagaggctgggacaaggaccgagaactgcaagaagtacttgcctcgtctctc
cttcgcgatcagcagatgggccacacccaagcgggcccccagcgtgctgatctgcgtctt
cgtctagctgctaataacgcagcggacatcctgtcacgtggtcagcaaaagctggtcgtt
tgcgcattgcgtatcgcccagggccacctcgttaatcaggctcgccgcggtcactgtatt
tatcttgtagacgacctgccgtccgagctggatgaccagcatcgccgcgccctgtgccgc
ttgcttgaagaattacgctgccaggtgttcatcacctgtgtagatcacgaattactgagg
gaaggctggcagacggaaacgccagttgccatgttccacgtggaacatggccgtatcacc
cagacccacgaccatcgggagtga
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