KEGG   Pseudomonas promysalinigenes: HU725_000770
Entry
HU725_000770      CDS       T07662                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pprg  Pseudomonas promysalinigenes
Pathway
pprg00300  Lysine biosynthesis
pprg00470  D-Amino acid metabolism
pprg01100  Metabolic pathways
pprg01110  Biosynthesis of secondary metabolites
pprg01120  Microbial metabolism in diverse environments
pprg01230  Biosynthesis of amino acids
Module
pprg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pprg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HU725_000770 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HU725_000770 (dapF)
Enzymes [BR:pprg01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     HU725_000770 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF SPO11_like
Other DBs
NCBI-ProteinID: QXI33940
LinkDB
Position
complement(179123..179953)
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRHTGIGFDQLLIVEAPSNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKGGIIELDVQNDGQVCVDM
GPPRFVPADIPFIADEQALSYPLDVDGQSHSIAAVSMGNPHAVLRVDDVHSAPVHELGPK
IENHPRFPQRVNAGFLQVIDRHRANLRVWERGAGETRACGTGACAAAVAAISQGWMDSPV
TLDLPGGRLNIEWAGPGKPVLMTGPAVRVFEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgctttaccaagatgcatgggctgggcaacgacttcatggtcctggacctg
gtcagtcagcacgcacacatccagcccaagcacgccaagcaatggggcgatcgccatacc
ggtatcggcttcgatcaactgctgatcgtcgaggcgccaagcaatccggaagtggatttc
cgctaccggatcttcaacgccgacggctctgaggtcgaacagtgcggcaacggtgcgcgc
tgcttcgcccgcttcgtgctggataagcgcctgactgcgaagaagcgtatccgcgtggaa
accaagggcggcatcatcgaactggacgtgcagaacgacggccaggtgtgtgtcgacatg
ggcccgccgcgcttcgttccggcagatatcccgttcatcgccgatgaacaggcgctgagc
taccccctcgacgtcgacggccagtcgcattcgatagccgccgtatccatgggtaacccc
cacgccgtgttgcgcgtcgatgacgtgcactcggcgccggtccatgaactgggtcctaaa
atcgaaaaccacccgcgctttccgcagcgagtgaatgccggtttccttcaggtcatcgac
cgccaccgcgccaacttgcgagtatgggagcgtggtgccggcgagacgcgtgcctgcggc
accggtgcctgtgccgcggccgtggctgcgatcagccagggctggatggactcacccgta
accctcgacctaccgggtgggcgcctgaacatcgaatgggctggcccgggcaagcccgtg
ttgatgaccggccctgccgtgcgggttttcgaaggacaggttcgtctctaa

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