Pseudomonas promysalinigenes: HU725_000775
Help
Entry
HU725_000775 CDS
T07662
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg00300
Lysine biosynthesis
pprg00470
D-Amino acid metabolism
pprg01100
Metabolic pathways
pprg01110
Biosynthesis of secondary metabolites
pprg01120
Microbial metabolism in diverse environments
pprg01230
Biosynthesis of amino acids
Module
pprg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU725_000775 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HU725_000775 (lysA)
Enzymes [BR:
pprg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HU725_000775 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QXI33941
LinkDB
All DBs
Position
complement(179958..181205)
Genome browser
AA seq
415 aa
AA seq
DB search
MNAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSYTDALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAQMGKIAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVDPFLDALDRLLALVDRLAECGIHLRHLDLGGGV
GVRYRDEEPPLVADYIKAIRERVGSRDLALVFEPGRYIVANAGALLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVSPRAGEGRAYDLVGPICETGDFLAKDRVLNLVEGD
LLAVESAGAYGFVMSSNYNTRGRCAEILVDGEQAFEVRRRETIAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctttcaactaccgcgacggtgaactgttcgcggagggcgtggccctgtcggcc
atcgccgaacgtttcggcacccccacctacgtttactcgcgcgcacacatcgaagcccag
taccgcagctacaccgatgccctgcaaggcaccgagcacctggtgtgcttcgccgtcaaa
gccaactccaaccttggcgtgctgaacgtcctggcgcgcttgggcgcgggtttcgatatc
gtctccggtggtgagctggagcgtgtgctggccgctggcgggcgagccgatcgcgtggtg
ttctccggcgtcggcaaaacccgcgaagacatgcgccgcgctctggaagtcggcgttcac
tgcttcaatgtcgaatccaccgacgagctcgagcgtctgcaagtggttgctgcccagatg
ggcaagatcgccccgatctcactgcgcgttaacccggacgtcgatgccggcacccacccg
tacatctcaaccggcctgaaagagaacaagttcggcatcgccatcgccgatgccgaagcg
atctacgtgcgcgccgcacagttgccgaacctggaggtggtcggtgtcgactgccatatc
ggttcgcaattgaccaccgtcgacccgttcctcgatgccctcgaccgtctgcttgcccta
gtagatcgcctggccgagtgcggcatccacctgcgccatctggacctcggcggcggcgtt
ggtgtgcgctatcgcgacgaagagccgccactggtggcggactacatcaaagccatccgc
gagcgcgtcggcagccgcgacttggccctggtattcgagcctggccgctacatcgtggcc
aacgccggcgccctgctgacccgcgtggaatacctcaagcacaccgaacacaaagacttc
gccatcatcgatgcggcgatgaacgacttgatccgcccggccctgtaccaggcctggatg
ggtgtcagcgcggtcagcccgcgggccggcgaaggccgtgcctatgacctggtcgggccg
atctgcgagaccggcgacttcctcgccaaagaccgcgtattgaacctggtcgaaggcgac
ctgctggcggtggagtcggcgggcgcctatggtttcgtcatgagctccaactacaacacc
cgtggccgttgcgcggaaatcctggtcgacggcgagcaggctttcgaagtccgtcgccgc
gaaaccatcgccgaactgtacgctggcgaaagcctgctgccggagtga
DBGET
integrated database retrieval system