KEGG   Pseudomonas promysalinigenes: HU725_000775
Entry
HU725_000775      CDS       T07662                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pprg  Pseudomonas promysalinigenes
Pathway
pprg00300  Lysine biosynthesis
pprg00470  D-Amino acid metabolism
pprg01100  Metabolic pathways
pprg01110  Biosynthesis of secondary metabolites
pprg01120  Microbial metabolism in diverse environments
pprg01230  Biosynthesis of amino acids
Module
pprg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pprg00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HU725_000775 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HU725_000775 (lysA)
Enzymes [BR:pprg01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     HU725_000775 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: QXI33941
LinkDB
Position
complement(179958..181205)
AA seq 415 aa
MNAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSYTDALQGTEHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAQMGKIAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVDPFLDALDRLLALVDRLAECGIHLRHLDLGGGV
GVRYRDEEPPLVADYIKAIRERVGSRDLALVFEPGRYIVANAGALLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVSPRAGEGRAYDLVGPICETGDFLAKDRVLNLVEGD
LLAVESAGAYGFVMSSNYNTRGRCAEILVDGEQAFEVRRRETIAELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaacgctttcaactaccgcgacggtgaactgttcgcggagggcgtggccctgtcggcc
atcgccgaacgtttcggcacccccacctacgtttactcgcgcgcacacatcgaagcccag
taccgcagctacaccgatgccctgcaaggcaccgagcacctggtgtgcttcgccgtcaaa
gccaactccaaccttggcgtgctgaacgtcctggcgcgcttgggcgcgggtttcgatatc
gtctccggtggtgagctggagcgtgtgctggccgctggcgggcgagccgatcgcgtggtg
ttctccggcgtcggcaaaacccgcgaagacatgcgccgcgctctggaagtcggcgttcac
tgcttcaatgtcgaatccaccgacgagctcgagcgtctgcaagtggttgctgcccagatg
ggcaagatcgccccgatctcactgcgcgttaacccggacgtcgatgccggcacccacccg
tacatctcaaccggcctgaaagagaacaagttcggcatcgccatcgccgatgccgaagcg
atctacgtgcgcgccgcacagttgccgaacctggaggtggtcggtgtcgactgccatatc
ggttcgcaattgaccaccgtcgacccgttcctcgatgccctcgaccgtctgcttgcccta
gtagatcgcctggccgagtgcggcatccacctgcgccatctggacctcggcggcggcgtt
ggtgtgcgctatcgcgacgaagagccgccactggtggcggactacatcaaagccatccgc
gagcgcgtcggcagccgcgacttggccctggtattcgagcctggccgctacatcgtggcc
aacgccggcgccctgctgacccgcgtggaatacctcaagcacaccgaacacaaagacttc
gccatcatcgatgcggcgatgaacgacttgatccgcccggccctgtaccaggcctggatg
ggtgtcagcgcggtcagcccgcgggccggcgaaggccgtgcctatgacctggtcgggccg
atctgcgagaccggcgacttcctcgccaaagaccgcgtattgaacctggtcgaaggcgac
ctgctggcggtggagtcggcgggcgcctatggtttcgtcatgagctccaactacaacacc
cgtggccgttgcgcggaaatcctggtcgacggcgagcaggctttcgaagtccgtcgccgc
gaaaccatcgccgaactgtacgctggcgaaagcctgctgccggagtga

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