Pseudomonas promysalinigenes: HU725_000965
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Entry
HU725_000965 CDS
T07662
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg00250
Alanine, aspartate and glutamate metabolism
pprg00310
Lysine degradation
pprg00350
Tyrosine metabolism
pprg00650
Butanoate metabolism
pprg00760
Nicotinate and nicotinamide metabolism
pprg01100
Metabolic pathways
pprg01120
Microbial metabolism in diverse environments
Module
pprg_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
HU725_000965 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HU725_000965 (gabD)
00310 Lysine degradation
HU725_000965 (gabD)
00350 Tyrosine metabolism
HU725_000965 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
HU725_000965 (gabD)
Enzymes [BR:
pprg01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
HU725_000965 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
HU725_000965 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
HU725_000965 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QXI33977
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All DBs
Position
212992..214434
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AA seq
480 aa
AA seq
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MQLKDAQLFRQQAFINGEWLDADSGQTINVTNPATGEVIGTVPKMGTAETRRAIEAADKA
LPAWRALTAKERSAKLRRWFELMIENQDDLARLMTTEQGKPLAEAKGEIAYAASFIEWFA
EEAKRVYGDTIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPYSALALVELANRAGIPAGVLSVVTGSAGEVGGELTGNSLVRKLSFTGSTEIGRQ
LMQECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQDG
VYDAFAQKLAAAVAKLKIGNGLEEGTTTGPLIDGKAVAKVQEHIEDAVGKGAKVLSGGKL
IEGNFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
MSRVFRVAEALEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCISV
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaaagacgctcagttgttccgccagcaagccttcatcaacggtgagtggctg
gatgcggacagcggccagaccatcaatgtgaccaacccggccacaggtgaagtcatcggt
accgtgccgaagatgggcactgcggaaacccgccgcgccatcgaagccgccgacaaggcc
ctgccggcctggcgtgcactgaccgccaaggagcgctcggccaagctgcgtcgctggttc
gaactgatgatcgaaaaccaggacgacctggctcgcctgatgaccaccgaacaaggcaag
ccgctggccgaagccaaaggcgaaatcgcctacgcggcctcgttcatcgagtggttcgcc
gaagaagccaagcgcgtttatggtgacaccatcccaggtcaccagccagacaagcgcctg
atcgtcatcaagcagccaatcggcgttacggcggccatcaccccgtggaacttcccggct
gccatgatcacccgtaaagccggcccggcccttgctgcgggttgcaccatggtgctcaag
cctgcctcgcagaccccatactcggccctggcgctggtcgaactggcaaaccgtgccggt
atcccggctggcgtgctgagcgtagttaccggcagcgctggtgaagtcggcggcgagctg
accggcaactccctggtacgtaagctgtccttcaccggctcgaccgaaattggtcgccag
ctgatgcaagaatgcgccaaggacatcaagaaagtttccctggaactgggtggcaacgct
ccgttcatcgtgttcgacgacgccgacctggacaaggcggtcgagggcgcgatcatctcc
aagtaccgcaacaacggccagacctgcgtttgcgccaaccgtatctatgtgcaggacggc
gtctacgacgcgttcgctcagaagctggctgccgcagtggccaaactgaagatcggtaac
ggcctggaagagggcaccaccactggcccgctgatcgacggcaaggctgtagccaaggtt
caggaacacatcgaagacgccgttggcaaaggcgccaaggtgctgtccggtggcaagctg
atcgaaggcaacttcttcgagccgaccatcctggttgacgtgccgaaaaccgctgcagtc
gctaaagaagagaccttcggcccactggcgccactgttccgcttcaaagacgaagccgaa
gtcattgccatgtccaacgacaccgagttcggcctggcctcgtacttctatgcccgtgac
atgagccgtgtgttccgtgttgccgaggccctggaatacggcatggtgggtatcaacacc
ggcctgatctccaacgaagtcgcgccattcggcggcatcaaggcttcgggcctgggtcgt
gaaggctccaagtacggtatcgaggactacctcgaaatcaagtacctgtgcatcagcgtt
tga
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