Pseudomonas promysalinigenes: HU725_001765
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Entry
HU725_001765 CDS
T07662
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg03030
DNA replication
pprg03430
Mismatch repair
pprg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU725_001765
03430 Mismatch repair
HU725_001765
03440 Homologous recombination
HU725_001765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprg03032
]
HU725_001765
03400 DNA repair and recombination proteins [BR:
pprg03400
]
HU725_001765
Enzymes [BR:
pprg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU725_001765
DNA replication proteins [BR:
pprg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HU725_001765
DNA repair and recombination proteins [BR:
pprg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HU725_001765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QXI34126
LinkDB
All DBs
Position
complement(388514..389224)
Genome browser
AA seq
236 aa
AA seq
DB search
MSLFTWLRPAAPMLDEALRQRLARLPKAKPLGVCTLREQRWVVLDLETSGLNTNRDQVLS
IGAVAIDDGAIDFAQQFERTLHRPEQKTNASVLIHGLGPSALAAGCDPAEALLDLLEFIG
DSPVLAFHAPFDQRMLARALRESLGYRLQLPFLDVAELAPMLNPDTVMREAGLDDWVSRF
GLQVDERHHASADAQVTAELALILFSQARRQQLDSPVQLEQRLAGWRRRKANIHGM
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttcacctggttgcgccccgccgcgcccatgctcgatgaggccctgcgccag
cgcctggcacggctgcccaaagccaagccactgggggtctgcacgctgcgcgagcaacgt
tgggtggtgctcgaccttgaaaccagcggcctgaacaccaatcgtgaccaggtgctgtcg
atcggcgccgtggccatcgacgacggggccatcgattttgcccagcagttcgagcgcacc
ctgcaccgccctgagcagaaaaccaacgccagcgtgctgatccacggcttggggccaagt
gccctggccgctggttgcgaccctgccgaagccttgctcgatctgctggagttcatcggc
gacagcccagtgctggcattccatgcgccgttcgatcagcgcatgctggcgcgtgcgcta
cgggaaagcctgggctatcgcttgcaattgccgtttctcgacgtagcggaactggcaccg
atgctcaaccccgataccgttatgcgcgaggcagggctggacgactgggtgtcgcgcttt
ggcctgcaggtggacgagcgccaccatgccagcgccgacgcgcaggtcacagcggagctt
gcgctgatccttttcagccaggcccgtcgccagcagctcgacagccccgtgcagctggaa
cagcggcttgctggctggaggcgtcgcaaagccaacattcatggcatgtga
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