Pseudomonas promysalinigenes: HU725_003360
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Entry
HU725_003360 CDS
T07662
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pprg
Pseudomonas promysalinigenes
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pprg03016
]
HU725_003360 (truB)
Enzymes [BR:
pprg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HU725_003360 (truB)
Transfer RNA biogenesis [BR:
pprg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HU725_003360 (truB)
Prokaryotic type
HU725_003360 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QXI34416
LinkDB
All DBs
Position
710219..711136
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTTTADAEGEVLQTREVTVGRADIEAVIPRFRGEIR
QVPPMYSALKRDGQPLYKLARAGEVVEREARSVTIGRLELLECEGTRARLSVGCSKGTYI
RTLVEDIGEALGCGAYVAELRRTQAGPFALAQTVTLEELEQAHAEGGNEALDRFLMPSDS
GLQDWPLVCLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNARFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgtatccgccgcaacgtcagcggcatcatcctgctcgacaagccg
ctgggtttcacttccaatgctgcgctgcagaaagtccgctggctgctcaatgccgagaag
gctggccacaccggcagcctcgacccgctggcaactggcgtgctgccactgtgcttcggt
gaggccaccaagttttcgcagtacttgctcgattccgacaagggctacgaaacggtcatg
cagatggggcagactactactactgccgacgccgaaggcgaagtcctgcagacccgcgaa
gtgaccgttggtcgcgccgacatcgaagccgtgatcccgcgttttcgcggggaaatccgt
caggtaccgccgatgtactcggcactcaagcgcgacggccagccgctttacaagctggcg
cgtgcaggagaggtagtggagcgcgaggcgcgttctgttactattggccgcttggagctg
ctcgagtgcgaaggcacccgcgcgcggttgtcggtaggctgcagcaaaggcacctatatc
cgtaccctggtagaggatatcggtgaggcgctaggctgcggtgcatacgtcgccgagctg
cgccgcacccaggccgggcccttcgccctggcccagacggttaccctcgaggaactcgag
caggcccacgccgaaggcggaaatgaggcgctcgaccgcttcctgatgccgtccgacagt
gggctgcaagactggcccctggtgtgcctgtccgagcacagcgcgttctactggctgcat
ggccaggcagtgcgggcgccggatgcaccgcagttcggcatggtccgcgtacaggatcac
aatgcccgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcggaatga
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