Pseudomonas promysalinigenes: HU725_003560
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Entry
HU725_003560 CDS
T07662
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HU725_003560 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprg03400
]
HU725_003560 (recC)
Enzymes [BR:
pprg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HU725_003560 (recC)
DNA repair and recombination proteins [BR:
pprg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HU725_003560 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QXI34451
LinkDB
All DBs
Position
757955..761419
Genome browser
AA seq
1154 aa
AA seq
DB search
MPTTTSLQPGFMVVHGNRLDDLRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DSRDDDLGGCGIAAAIDVQLPGSFMWQLYRKVLGREEIPEVSLLDKAPLTWRLMRLLPAL
IERPHFEPLRRFLTDDSDLRKRYQLAERLADLFDQYQVYRADWLKDWAAGEHTLNSARGE
RKPLAPGNRWQAELWRALLEDVGEQSMAQSRAGVHQRFLERIEKLQSAPPGLPSRVIVFG
ISSLPAQALEALAGLSRFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQQRKPGMPVQL
DDESLHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYQGVFSDGRIDLFSEGQPTTLLSQL
QDDILELRPLAETRDCWPAVDPSKDRSVRFHVAHSPQREVEILHDQLLARFSADPTLRPR
DVIVMVPAIDTYAPHIRAVFGQLQRNDPRYIPFTLTDQGQRGRDPLLIALEHLLKLPDSR
FAVSEVLDLLDVPALRARFGIRESDLPTLHRWIQGAGIRWGLNAEQRASLGLPHGLEQNS
WRFGLRRMLLGYAVGMGEGCDGIEPYDEIGGLDAALIGPLVALLDALEVANQALSQPATA
SEWGDRLGALLQVFFLAEEEHDEFLLLQLLALRDNWLEVCETVSLQDPLPLTVIREAWLS
GLDEGKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQPPLDFDLMASDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLVAGWRLKG
SSDGQALLHALTQEHPLQPFSARYFDKGTGLFSFAHEWQLLHRQNSDEQSPELALAPYVS
DEPLTLTQLQDFVRHPVRHFFSQRLKVFFEALQAPTPDEEPFVLDALQRYSASESLLVAA
LSDPENAEYALQAQARRLQACGLLPLAGFGEMLQTELIQPLPDLLQRHGQLLRRWPTVVE
GALPIQFEHANQRLEGWLGRVYQADDHSLLSITTVPNTIGAGRNNLKWHRLIASWVMHLA
ACAVGYPLHSALLASDITLLLGPLPQAQARERLGELLIARQAGMNAPLPVAAKTAFAWLG
QQDPDKALAAATRAYEGDGRSSFGERSESVALARQFSDFAALSADETFEGWCETLYRPLF
SAAWQAQGNPEREA
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccactacctcactgcaacctggtttcatggtcgtccatggcaaccgtctggat
gacttgcgtagcctggtggtgagttggatgcgacgctacccgttagctccgctggaaaac
gaaatcgccttggtccagagcaatggtattgcccaatggctcaaactcgccctggctgaa
gattcccgggacgatgatcttggaggctgtgggattgccgccgccatcgatgtgcaactg
ccaggcagtttcatgtggcagctgtatcgcaaagtacttggccgtgaagaaatccctgaa
gtgtcgctgctggacaaggcgccgctgacctggcgtctgatgcgtctgttacctgccctg
atcgagcgtccacatttcgaaccactgcgccgctttctcaccgatgacagtgacttgcgc
aagcgctatcagttagcagagcgtctggctgatttgttcgaccagtaccaggtataccgt
gccgactggctcaaggactgggcagccggcgagcacacgctcaacagcgcccgcggtgaa
cgtaaaccccttgcaccgggcaaccgctggcaagctgagctctggcgggcgctgcttgag
gatgtgggtgagcagagcatggcgcaaagccgggcaggggtgcatcagcgcttccttgaa
cgtatcgaaaaactgcagagtgcaccgcctggattgccctcgagggtcatcgtattcggt
atttcctccctgcccgcccaggcattggaggcactagccgggctgtctcggttcagtcag
gtgttgctgtgtgttcacaatccttgtcgccaccattgggccgatatcgttgccgacaaa
gatctcctgcgtcatcaatacaagcgccaacagcgcaagccaggcatgccggtgcagttg
gacgatgagtcactgcatcaacacgcccacccgctcttggcagcgtggggcaagcagggc
cgtgactacatcaacttgttggacagctacgatgaccccggcagctaccaaggcgtattc
agcgatgggcgcatcgatctgttcagcgaaggccagcccaccacactgctgagtcagctg
caggacgatatccttgaactgcgaccacttgcagaaacgcgagactgctggcctgcggtc
gacccgagcaaagaccgctcggtgcgttttcacgtggcacacagccctcagcgcgaagta
gaaattctgcacgatcagttactggcacgcttcagcgccgaccctacgctgcgtccacgc
gatgtgatcgtgatggtcccagccatcgacacctatgcgccacacatccgcgcagttttc
ggccaattgcagcgcaacgacccgcgttacattcctttcaccctcaccgatcagggccaa
cgtggccgcgacccgctgttgattgccctggagcatctgctcaagctgccggacagccga
tttgccgtcagtgaggtccttgacctgctcgatgtcccggctctgcgcgcacgcttcggc
attcgtgaaagcgacttgccaaccctgcaccgttggatccaaggcgcgggcattcgctgg
gggctgaacgctgaacagcgcgcctccctagggttgccccacggtcttgagcagaacagc
tggcgtttcgggctgcggcggatgctgctgggttacgccgtcgggatgggcgaaggttgc
gacggtatcgaaccgtacgatgaaatcggcggcctggacgcagcattgattggcccgctg
gtggcgctgctcgatgcgctagaggtggccaaccaggctttgtcccagccagccacggcc
agtgagtggggggatcgactgggcgccctgttgcaagtgttcttcctggctgaagaggag
cacgacgagtttctcctgctgcaactgctggcccttcgtgacaactggctggaggtctgc
gaaaccgtcagcctgcaagacccgttgccgctcacggtgatccgcgaggcttggctttcg
gggttggacgaaggcaagttgtcccagcgctttctcgccggctcggtgaacttctgcacc
ttgatgcccatgcgcgccatccccttccgggtagtgtgcctgctaggcatgaacgatggt
gactacccgagggcacagccgcccctggatttcgacctgatggccagtgactatcgccca
ggcgaccggtcgcgacgtgaggacgaccgctatctgctgctcgaagcgttgctgtcggca
cgtgaccagctttacatcagttgggtgggccgcagcatccgtgacaacagtgaacggccc
gcctcggtattgatcggccaactgcgcgaccacctggttgccggttggcgcctcaaggga
agttctgacggccaggcactgctgcatgcgctgacccaggagcacccactgcagccattc
agtgcacgctatttcgacaagggcactggattgttcagcttcgcccatgaatggcaattg
ttgcatcgccagaacagcgacgagcagtcgcctgaactagcactcgcgccgtatgtcagt
gatgagccgctgacgctgacccagttgcaggactttgttcgtcaccccgtacggcatttc
ttcagtcagcgcctgaaggtattcttcgaagccctgcaggcgcctacgccagacgaagag
cccttcgtactcgatgccttgcagcgctatagcgccagcgaaagcttgctggtcgccgcg
ctgagcgaccctgaaaacgccgaatatgccctgcaagcccaggctcgccggctgcaagcc
tgcggattgctgcctctggcgggcttcggtgaaatgttgcagaccgaactgatccagcca
ttgcccgatctgctgcaacgccatggtcaactactgcggcgctggcctacggtggtggag
ggagcactgcccattcagttcgagcatgccaaccagcgtctggagggctggctgggccgg
gtttatcaagctgacgaccacagcctcttgagtatcaccaccgtgcccaacaccatcggc
gcggggcgcaacaacctcaagtggcatcggctgatcgccagttgggtgatgcacctggcc
gcctgcgctgtgggttatcccctgcacagcgctctgttggccagtgacatcaccctgctg
ctcgggcctttgccacaggcgcaggcgcgcgaacgcttgggggaattgctgatcgcccgc
caggcggggatgaacgcgccactgccagttgccgccaagaccgccttcgcctggctgggg
cagcaagacccagacaaagccctggcggccgctacccgtgcctacgagggcgatggccgc
agcagtttcggcgaacgcagcgaaagtgttgctctggcacggcagttttccgacttcgct
gcactgagcgccgacgagacctttgaaggctggtgtgaaaccttgtaccgccctctgttc
agcgcagcctggcaggcccagggcaacccggagcgtgaagcatga
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