KEGG   Pseudomonas promysalinigenes: HU725_004805
Entry
HU725_004805      CDS       T07662                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pprg  Pseudomonas promysalinigenes
Pathway
pprg02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pprg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HU725_004805
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pprg02022]
    HU725_004805
Two-component system [BR:pprg02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   HU725_004805
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 FleQ AAA AAA_2 MCM AAA_3 AAA_16
Other DBs
NCBI-ProteinID: QXI34684
LinkDB
Position
complement(1024136..1025464)
AA seq 442 aa
MLNSVIVVDDEASIRTAVEQWLSLSGFSVQLFACAEDCLAQLPAHFAGVVISDVRMPGMG
GLQLLERLQLDDPDLPVILLTGHGDVPMAVEAMRSGAYDFLEKPFTPQHLLGSLRRALEK
RQLVLENRRLHEQADLKSRLETTLLGMSQGLQQLRRQVLDLASLPVNVLLRGETGSGKER
VARCLHDFGPRADKPFVALNCAAIPESLFEAELFGHESGAFTGAQGKRIGKLEYANGGTV
FLDEIESMPLAQQAKLLRVIQEQKLERLGANQSISVDLRIIAATKPDLLEEARAGRFRED
LAYRLNVAELRLAPLRERREDIPLLFEHFAQSAAARLGRAAPPLSGPQLSQLLCHDWPGN
VRELANAAERHALGLGSPNIEVAPAGPSLVEQMEAFEAQCLRAALRQHAGEIKAVMQTLQ
LPRRTLNEKMQRHGIVREDFVQ
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgttgaactcggtgatcgtcgtggatgatgaagccagcatccgcaccgcggtcgaacag
tggctgagcctgtctggcttcagcgtgcagttgttcgcttgcgccgaggactgcctggcg
caactgcctgcgcactttgccggcgtggtcatcagcgacgtacgcatgccaggcatgggt
ggcctgcagctgctcgagcgcctgcaactggatgacccggacctgccggtgattctgctg
accggccacggcgatgtgccgatggcggtggaggcgatgcgcagtggtgcgtatgacttc
ctggaaaagcccttcaccccacagcacttgctcgggagcctgcgacgggcactggaaaag
cgtcagttggtgctagagaaccgccgcctgcatgaacaggccgacctcaagtcgcggctg
gaaaccaccttgctgggtatgtctcaaggtttgcagcagctacgcaggcaggtcttggac
ctggccagcttgccagtcaacgtgctgctgcgcggtgaaaccggcagcggcaaggagcgg
gtagcgcgttgcctgcacgacttcgggccgcgcgccgacaaaccattcgtggcgctcaac
tgcgcagccatccccgaatcactgttcgaagccgaattgttcggccatgaaagcggtgca
ttcaccggtgcgcagggcaaacgcatcggcaaactggagtacgccaacggcggcacggtg
tttctcgacgaaatcgaaagcatgccgttggcccagcaggcaaagctgctgcgggtgatc
caggagcagaaactggagcggctaggggccaaccagagcatcagcgtcgacttgcgcatc
atcgccgccaccaaacctgacttgctcgaagaggcgcgggccgggcggtttcgcgaggac
ctggcctatcgcctgaatgtggcggagttgcgcttggcaccgctgcgcgaacggcgtgaa
gacatacccctgctgttcgagcattttgcacagtcggccgctgccaggttaggacgcgcg
gcgccgccgttgagcggtccacaactctcgcagctgctgtgccacgattggccaggcaat
gtacgggaattggccaacgcagcggagcgccacgcgctgggcctgggctcgccgaatatc
gaagtcgcccctgccggcccatcgctggtggagcagatggaagctttcgaagctcagtgc
ctgcgtgcagccttgcgccagcacgcaggggaaatcaaagcagtgatgcagacgctgcaa
ctgccgcgccgcaccctgaacgaaaagatgcagcgtcacggaattgttcgtgaggacttc
gtgcaatga

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