Pseudomonas promysalinigenes: HU725_004870
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Entry
HU725_004870 CDS
T07662
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HU725_004870 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprg03400
]
HU725_004870 (ung)
Enzymes [BR:
pprg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HU725_004870 (ung)
DNA repair and recombination proteins [BR:
pprg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HU725_004870 (ung)
Prokaryotic type
HU725_004870 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QXI34696
LinkDB
All DBs
Position
1038650..1039342
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AA seq
230 aa
AA seq
DB search
MTEDDRIKLEPSWKAALRAEFDQPYMQQLREFLRQEHAAGKEIYPPGPLIFNALNTTPLS
QVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELQRDLNIPIPNHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWELFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFLGCGHFSRTNAFLEQRGMAPINWALPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagacgatcgcatcaaactcgaacccagctggaaggctgccctacgcgccgag
ttcgaccagccctacatgcagcagttgcgtgagttcctgcgccaggagcacgcagccggc
aaagagatctacccgccggggccgttgattttcaacgcgctcaataccaccccgctgagc
caagtcaaagtggtgatcctcggccaggacccgtaccacggccccggccaagcccatggc
ctgtgcttctcggtacagccgggcgtaccggcaccgccgtcgctggtcaacatctacaaa
gagttgcagcgcgacctgaacatccccatccctaatcacggctacctgcaaagctgggcc
gagcagggcgtgctgctgctcaataccaccatgacggtcgagcgcgccaatgcagcctcg
catgccaagaagggttgggagctatttaccgaccgaatcatccaggtagtcagcgagcag
tgccccaacgtggtgttcctgctgtggggggcacatgcccagagcaagcagaagctgatc
gacggcaccaagcacctggtgctcaagtcggtgcatccctcgccactgtcggcataccgc
ggttttcttggttgtgggcacttcagccgtaccaatgcctttctcgaacagcgcggcatg
gcgcctatcaactgggcattgccgccactgtga
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integrated database retrieval system
