Pseudomonas promysalinigenes: HU725_007040
Help
Entry
HU725_007040 CDS
T07662
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HU725_007040 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprg03400
]
HU725_007040 (uvrB)
DNA repair and recombination proteins [BR:
pprg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU725_007040 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HU725_007040 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
HAMP
Motif
Other DBs
NCBI-ProteinID:
QXI35095
LinkDB
All DBs
Position
1518890..1520905
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQMVEGIEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVDNIAAFDPLTGEVFRKLPRF
TFYPKSHYVTPRETLLQAVEGIKEELADRLEYLHKANKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAVSPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEIRKRVAEGDRVLATTLTKRMAEDLTDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADSITGSMQRAIDETERRREKQIAFNQANGIVPKGVVKDIADIMEGATV
PGARSKKRKGMAKAAEESARYEAELRTPGEITKRIKQLEEKMMQFARDLEFEAAAQLRDE
ITKLRERLITS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtttcagctcgtcacccgtttccagccggcaggcgaccagcccgaggccatc
cgtcagatggtcgaaggcatcgaggccggcctctcacaccagacgctgcttggggtgact
ggttcgggcaagaccttcagcatcgccaacgtcattgcgcaggtacagcggccaaccctg
gtactggcgccaaacaagacgctggcggcgcagttgtatggcgagttcaaggcgttcttc
cccaacaacgccgtcgaatacttcgtctcctactacgattattaccagccagaagcctat
gtgccgtcgtcggataccttcatcgagaaggatgcctcgatcaacgaccacatcgagcag
atgcgtctgtcggctaccaaggcgttgttggaacgccgcgatgcgatcatcgtcactacg
gtgtcatgtatttacggcctgggcagccccgagacgtacctgaagatggtgctgcacgtg
gaccgcggcgacaaactcgaccagcgcgccttgctgcgccgtctggccgacctgcagtac
acccgcaacgaaatggactttgcccgtgccactttccgggtgcgcggcgacgtcatcgac
atcttcccggctgaatcggaccttgaggctatccgcatcgagctgttcgatgatgaagtg
gataacatcgcagctttcgatccgctgaccggcgaggtgtttcgcaagctgccacgcttc
accttctaccccaagagccactacgtgacgccacgagaaaccttgctgcaggcggtggag
ggcatcaaagaagagctggcggatcgtctggagtacctgcacaaggccaacaagctggtc
gaggctcagcgcctggagcagcgtacccgcttcgatctggaaatgatccttgagcttggc
tattgcaacggtatcgaaaactactcgcgctacctgtccggccgcccggccggggcgccg
ccgcccaccctgtacgactatttgccggccgatgcgctgctggtgatcgacgagtcccac
gtcagcgtgccccaggtcggcgccatgtacaaaggcgaccgctcgcgcaaggaaaccctg
gtcgaatacggcttccggctgccgtcagcgcttgacaaccgcccgatgcgtttcgatgag
tgggaggctgtcagtccacagactattttcgtttcggccaccccgggcccttacgaagcc
gaacatgccggccgggtggtcgagcaggtggtgcgcccgaccggtctggtcgacccgcaa
gtggaggtgcgcccggcgctcacccaggtcgacgacctgctgtcggagatccgcaagcgt
gtggctgagggcgatcgggttctggcaaccacgcttaccaagcgcatggccgaagacctt
accgattacctggccgaccatgacgtcagggtgcgttacctgcactccgacatcgatacc
gtcgagcgtgtcgaaatcatccgggatctgcgtttgggcaccttcgatgtgctcgtgggt
atcaacctgctgcgcgagggtctggatatgcccgaggtgtcgctggtggccatcctcgat
gctgacaaggaaggtttcctgcgttccgagcgttcgctgattcagacgatcggccgtgct
gcgcgcaacctcaatggccgggcgattctatacgccgacagcatcactggctccatgcag
cgtgccatcgacgaaaccgagcggcgtcgcgagaaacaaattgccttcaaccaggccaac
ggcatcgtgccaaagggtgtggtcaaggacatcgccgatatcatggagggtgccaccgtg
cccggtgcgcgcagcaagaagcgcaagggcatggcaaaggcagccgaggagagcgcccgc
tacgaggccgagctgcgcacgccaggcgaaatcaccaaacgcatcaaacaactggaagag
aagatgatgcagtttgcacgcgacctggagttcgaggccgccgcgcagttacgcgacgag
attaccaagctgcgcgagcgcctgatcaccagttga
DBGET
integrated database retrieval system
