Pseudomonas promysalinigenes: HU725_007620
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Entry
HU725_007620 CDS
T07662
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg00071
Fatty acid degradation
pprg00280
Valine, leucine and isoleucine degradation
pprg00310
Lysine degradation
pprg00362
Benzoate degradation
pprg00380
Tryptophan metabolism
pprg00410
beta-Alanine metabolism
pprg00640
Propanoate metabolism
pprg00650
Butanoate metabolism
pprg00907
Pinene, camphor and geraniol degradation
pprg00930
Caprolactam degradation
pprg01100
Metabolic pathways
pprg01110
Biosynthesis of secondary metabolites
pprg01120
Microbial metabolism in diverse environments
pprg01200
Carbon metabolism
pprg01212
Fatty acid metabolism
Module
pprg_M00087
beta-Oxidation
pprg_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HU725_007620 (fadB)
00650 Butanoate metabolism
HU725_007620 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HU725_007620 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HU725_007620 (fadB)
00310 Lysine degradation
HU725_007620 (fadB)
00380 Tryptophan metabolism
HU725_007620 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HU725_007620 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HU725_007620 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HU725_007620 (fadB)
00930 Caprolactam degradation
HU725_007620 (fadB)
Enzymes [BR:
pprg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HU725_007620 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HU725_007620 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HU725_007620 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HU725_007620 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NfeD1b_N
SDH_protease
Motif
Other DBs
NCBI-ProteinID:
QXI35195
LinkDB
All DBs
Position
1648149..1650296
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLDELRQAVDAIKADASVTGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMSTTAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANYGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIARDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVVDASVQEVLAPIVFEQREVSDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKTGQRFFN
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaatcgcctgaccctggacgaattg
cgccaggctgtcgatgccatcaaggccgacgcctcggtgacaggtgtgatcgtcagcagc
ggtaaggacgtgttcatcgtcggcgccgatatcaccgaattcgtcgacaacttcaagctg
cccgaggccgaactggttgccggcaacctggaagccaatcgcatcttcaacgccttcgaa
gacctcgaggtgcccactgtggcggccatcaacggtatcgccctgggcggcggcctggag
atgtgcctggcggccgactaccgagtgatgtccaccactgccaagattggcctgcctgaa
gtcaagttgggcatttacccaggctttggcggcaccgtgcgcctgccgcgcctgatcggt
tccgacaatgccatcgagtggatcgccgctggtaaggaaaaccgtgccgaagacgccctg
aaagttggcgcggtagatgcagtcgtcgcacctgaactgttgcaggccggcgccctggac
ctgatcaagcgcgccatcagtggcgagctggactacaaagccaagcgccaacccaagctg
gaaaaactcaagctcaacgccatcgagcagatgatggccttcgaaaccgccaagggcttc
gtcgccggccaggcaggcccgaactacccggcaccggtcgaggcgatcaagagcattcaa
aaagctgccaactacggccgcgacaaggcgctggaagtcgaagccgcgggcttcgccaag
ctggccaagacttcggtcgccgaaagcctcatcggtctgttcctcaacgatcaagagctc
aagcgcaaggctaaagcccacgacgaaatcgcccgtgatgtgaagcaggcggcggtactg
ggcgctggcatcatgggcggtggcatcgcctaccagtcggcggtcaaaggcacgccgatc
ttgatgaaggacatccgcgaggaggccatccagctgggccttaacgaggcatccaagctg
ctcggcaatcgcgtcgagaaaggccgcctgacgccggccaagatggccgaggcgctcaat
gccattcgcccgaccctgtcgtacggtgatttcgccaacgtcgacatcgtcgtcgaggcc
gtggtcgagaaccctaaagtcaaacaggccgtgctggccgaagtggaaggccaggtcaag
gaagatgcgatcctcgcctccaatacttcgaccatttccatcaacctgctggccaaggcg
ctcaaacgtccagaaaacttcgttggcatgcacttcttcaaccccgtgcacatgatgccg
ctggtcgaagtgattcgtggcgagaagtccagtgaagtggcggttgccaccactgtggcc
tatgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc
aaccgagtgctgttcccgtacttcggcggcttcgccaaactggtcagcgcgggcgtcgac
ttcgtgcgcatcgataaggtcatggaaaagttcggctggccgatgggcccggcctatctg
atggacgtagtcggtatcgacaccggccaccacggccgtgacgtcatggccgaaggtttc
ccagaccgcatgaaggacgagcgccgctcggctgtcgatgccctctacgaagccaaccgt
cttggccagaagaacggcaaaggcttctacgcctacgaaactgacaagcgtggcaagcct
aaaaaagtcgtcgatgccagcgtgcaggaggtactcgcaccaatcgtcttcgaacagcgt
gaagtgagcgacgaagacatcatcaactggatgatggtgccgctgtgcctggaaaccgtg
cgctgcctggaagacggtattgtcgaaaccgcagccgaagccgacatgggcttggtctac
gggattggcttccctccgttccggggtggtgcgctgcgctacatcgactcgatcggtgtg
gctgaattcgttgccctggccgaccagtacgccgacctggggccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaccggccagcgcttcttcaactga
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