Pseudomonas promysalinigenes: HU725_007670
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Entry
HU725_007670 CDS
T07662
Name
(GenBank) DEAD/DEAH box helicase
Organism
pprg
Pseudomonas promysalinigenes
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SNF2_assoc
SWIM
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXI35204
LinkDB
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Position
complement(1658763..1662071)
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AA seq
1102 aa
AA seq
DB search
MSRAALQLLHEYPNWVQSFSEAVLQRGARYAQEGRVKIEQCSGPLIEASCSGSGNSQYRQ
KITLTAIAGRCHVRGQCSCPVGQNCKHCAAALLVLGESDAIARHDDNALPANLQHWLNSL
EPPNQASGDAPDKRGRMVCYQIVLSDEPGCAVRVRKGIREEQGLRFSRVQSLYELLYNPP
SFVKGEDLRILRLLSALNQNGNQERGYSLKGQEGGELFQRMLDTERLLCLDNMPLLREGT
TLTAEFRWVRLENGYYRGVWYHGQTPLNCVIALVPLYYLDIINGEVGKLEHNLDPHIALQ
LTIAPDIPEHLVVPLSHKLNALNHQLPTPTTLSEQWVDDLQPRPHLTLGSLEFSAYMPKT
GRMQRQMQHRAALAFDYDGLRATGNDDKPLTRLVAATSQRIRRQPQAEQAIRKVLRDLGF
KPATRQSKALPDSAGEMLQLPDDEAWLRFARDGLPRLREAGWEIDIHRDFAFNLQEVDDW
YASIDEAPGHEWFDLELGIVVEGQRHSLLPIVLQLLRNNPELLRPSELARRSDDEHLLID
LNRGRLDSPALRVALPYGRIKAVMGTLGELYLHEDAVGPTLRLDRADAARLNDIDHLPLH
WEGGAHVRDLGRRLRDARDLQVEVPSGLKASLRPYQQQGLNWLQALREMGTGGILGDDMG
LGKTLQTLAHLLLEKQSGRLNAPALAVMPTSLVPNWLDEAKRFAPNLRVLALHGPGRSKH
FAKLHEYDLILTTYALVPRDLEQLRAQAWHVLVLDEAQNIKSSTSKAAQAVCELQANQRL
CLTGTPMENNLGELWSIFNFLMPGWLGDVKRFNQDYRNPIERHADTERLAHLANRVRPFL
LRRTKEQVATELPAKTEMVHWVDLSDAQRDTYEAVRVAMDKKVRDEIARNGASRSQIVIL
DALLKLRQVCCDLRLVKGVETKGNQADKGKLGALLEMLDELLSEGRRVLLFSQFTSMLAL
IEQELDKRKIRYSLLTGETRDRRTPVQQFQQGESEVFLISLKAGGVGLNLTRADTVIHFD
PWWNPASENQATDRAYRIGQDKPVFVFKLITRGTVEEKIQALQQEKASLAASLLDGGQAG
HWRLGDEEIEALFAPLPGKRGR
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgccgctctgcaattgctgcacgagtatccgaattgggtccagtcgttctcc
gaagcggtactgcaacgcggcgcgcgctacgcccaagagggccgtgtcaaaatcgaacaa
tgcagtggcccgctcatcgaggccagttgcagcggcagcgggaatagccagtaccgccag
aaaatcaccctcaccgctattgctgggcgttgtcatgtacgtggccaatgcagctgcccg
gtggggcaaaactgcaagcattgcgcggcggccctgttggttctaggcgagtctgacgcc
atagcccggcatgacgataacgcactgcctgccaatttgcagcactggctcaacagcctc
gagccccccaaccaggcgtctggcgatgcacccgacaagcgcgggcgcatggtctgctac
cagattgtcttgagcgatgagccgggttgcgccgtgcgggtgcgtaaaggcatacgcgaa
gaacaaggcctgcgctttagccgtgtgcagtcactttacgaattgctttacaaccctcca
agtttcgtgaagggagaagacctgcgcattctgcgcttgctttcggcgctcaaccagaat
ggcaaccaagagcggggttactcgctcaagggccaggaaggcggcgagctgttccagcgc
atgctggataccgaacggctgctctgcctcgataacatgccgctgctgcgcgaaggcacc
acgctgacggcggaatttcgctgggtgcgcttggaaaatggctactatcgaggggtctgg
tatcacggccaaaccccgctcaactgcgtgattgcgcttgtgccgctgtactacctggac
atcatcaacggcgaagttggcaagctcgaacacaatctcgatccgcacatcgctctgcaa
ctgaccatcgctcctgatatcccggaacacctcgtcgtgccactcagccacaagctcaat
gccttgaaccaccaactgcccaccccgaccacactgagcgaacaatgggtcgacgacctg
caaccccggccccacctgacgctgggcagcctggaattcagcgcctacatgcccaagacc
ggccgcatgcaacggcagatgcaacaccgcgccgcgctggcattcgactacgatgggttg
cgcgccacgggcaacgatgacaagccactgactcgactggtcgcggccaccagccagcgc
atccgccgccagccccaggccgagcaggccatacgcaaggtgctgcgtgacctgggcttc
aaacctgccacccgccagagcaaggccttacccgacagcgcgggtgaaatgttgcaactg
cccgacgacgaagcctggctgcgcttcgcccgcgacggtttgccacgcctacgcgaggcg
ggctgggagatcgatatacaccgcgacttcgccttcaacctgcaggaggtggacgactgg
tacgccagtatcgacgaagcgcctggccacgaatggttcgacctggagctggggatcgtg
gtcgaaggccagcgccacagcctattgccgatcgtgctgcagttgctgcgaaacaatcct
gagctgttgcgccctagcgagctggcgcggcgcagcgacgacgaacacctgctgatcgac
ctcaatcgcgggcgcctggacagcccagcgttacgcgtcgcgctgccctacggccgcatc
aaggctgtcatgggcaccttgggtgagctttatctacacgaggacgcggtcggcccaacc
ctacgcctggaccgcgccgatgccgcacgcctgaacgacatcgatcacctgcccctgcac
tgggagggcggcgcccacgtacgcgatctcggtcggcgccttcgtgatgcccgcgacctg
caggtcgaagtgccgagcgggctcaaggccagcctgcgcccttaccagcagcaaggtctg
aactggcttcaggcgctacgtgaaatgggcaccggcggcatccttggcgatgacatgggg
ctcggcaagacgctgcagactctggcccacctgctgctggaaaaacagtcagggcgcttg
aacgccccggcactggcggtgatgcctaccagcctggtgcctaactggctggacgaagcc
aagcgctttgctccaaaccttcgcgtgctagccctgcacggccccggccgcagtaagcat
ttcgccaagctgcatgagtacgacctgatattgacgacctacgccttggttcctcgggac
cttgagcaactgcgcgcgcaagcctggcatgtgctggtgctggacgaggcgcagaacatc
aagagcagtaccagcaaggccgcccaggccgtgtgtgaactgcaggccaaccagcgcttg
tgcctgactggcacaccaatggaaaacaacctgggcgaactgtggtcgatcttcaacttc
ctgatgcctggttggctgggcgacgtgaagcgcttcaaccaggattaccgtaacccaatc
gaacgccacgccgacaccgaacgcctggcgcacttggccaaccgagtgcggcctttcctg
ctgcgccgtaccaaggagcaagtggccaccgagctgccagccaagaccgagatggtgcac
tgggtcgatctcagtgatgcccagcgcgacacttacgaagcggtgcgcgttgccatggac
aaaaaagtccgcgacgaaatcgcgcgcaatggcgcatcgcgcagccagatcgtgatcctc
gatgctctgctcaaactgcgccaggtatgctgcgacctgcggctggtcaaaggtgtcgag
acaaagggcaaccaagccgacaaaggtaaacttggtgcgttactggagatgcttgatgag
cttctgagtgagggccgtcgggtgctgctgttctcacagttcacctccatgctggcgctt
atcgagcaagaactcgataagcgcaaaatccgctatagcttgcttaccggcgaaacccgc
gaccggcgtactccagtgcagcaattccagcaaggtgaaagcgaggtgttcctgatcagc
ctcaaggccggtggagtggggctgaaccttaccagggccgacaccgtgatccacttcgac
ccgtggtggaacccagccagcgagaaccaggcgactgaccgcgcctaccgtatcggtcag
gacaagccggtgttcgtcttcaagctgattacccgaggcacggtggaagaaaagatccag
gcgctgcagcaagaaaaggcctcactggcggcgagcctgctcgatggtggccaggcgggg
cattggcgtctgggcgatgaagaaatcgaggcactgtttgccccgctgcccggcaagcgg
ggccgctag
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