Pseudomonas promysalinigenes: HU725_011845
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Entry
HU725_011845 CDS
T07662
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pprg
Pseudomonas promysalinigenes
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprg03009
]
HU725_011845
Ribosome biogenesis [BR:
pprg03009
]
Prokaryotic type
ribosomal protein modification factors
HU725_011845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Sin3a_C
Motif
Other DBs
NCBI-ProteinID:
QXI31756
LinkDB
All DBs
Position
complement(2616959..2619145)
Genome browser
AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRDIPTENIRLSQNNIVDPENRYNQIFKIQVELPEDISEKDRQGILRSIDRCTVKKVVQT
GPEFIIEQVDNLDADAQGLLMPVAETTTYIPGKDLPLEQTIANMSGILAGLGMKIEIASW
RNIVPNVWSLHVRDAQSPMCFTNGKGSTKEAALASALGEFIERLNCNFFYNDQFWGEDIA
NAPFVHYPNEQWFKPGPKDALPTQILDEHCLGIYNPDGELRGSHLYDTNSGNTERGICSL
PFVRQSDQQVVYFPSNLIENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGELAL
PDVPPHVLAKYPGILAGIQGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFGA
HPSFEVALERSLTELLQGRSFEGLNDLPQPTFESHALTEPNNFVEHFIDSSGVVSWRFFS
AKADFEFVEWDFSGHGEDSNSQEAATLFGILEGLGKEVYMAVYDNLGATACRILVPGYSE
IYPVEDLIWDNTNRALDFRADILNLHSLDDRALRALRRRLNNLDVDDYTTITTLIGVEFD
ENTVWGQLTILELKLLICLALKRLEDAKELVEAFLQFNDNTVDRGLFYQALNVVLEVYLD
DELEIADYETNLRRMFGNERMDAALGSVEASVRFYGLTPTSTKLEGLDRHLRLIESYKKL
HAARAKFA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtcaactttctcgacaaccttcgtcttgaagccaaattcgacgacttc
acggtgatcgccgatcagccgatccgctacaaaggcgatggttcggcccctggcccgttc
gactatttcctggcgtcctcggcgctgtgtgcggcgtacttcgtcaagctctactgccag
acccgcgatatccccacggagaatattcgcctgtcgcagaacaatatcgtcgacccggaa
aaccgctataaccagatcttcaagattcaggtcgagctgcctgaggacatttccgagaag
gatcgtcagggcatcttgcgatcgatcgatcgctgcaccgtgaaaaaagtcgtgcagacc
ggccctgagttcatcatcgagcaggtcgacaacctcgacgccgatgcccagggcctgctg
atgccggtggccgaaaccaccacctacattcccggcaaggacctgccgctggaacagacc
atcgccaacatgtccggtatcctcgcaggcctgggcatgaagatcgaaatcgcctcatgg
cgcaacatcgtgcctaacgtctggtcgctgcacgtacgcgatgcgcagtcgccgatgtgc
ttcaccaacggcaagggctcgaccaaagaggccgcgctggcctcggcgctgggtgagttc
atcgagcggctgaactgcaacttcttctacaacgaccagttctggggtgaggacattgcc
aatgcgccgttcgtgcattatccgaacgagcaatggttcaagcctgggccaaaagacgct
ttgcccacgcagattctcgatgagcactgcttaggcatctacaacccagatggcgagctg
cgcggttcgcacctgtacgacaccaactcgggcaacaccgagcgcggcatctgttcgctg
ccattcgtgcgccagtccgatcaacaggtggtgtactttccctccaacctgatcgaaaac
ctgttcctgagcaacggcatgagcgctggtaacaccttggccgaggcccaggtacagtgc
ctgtcagaaattttcgagcgtgccgtcaaacgcgagatactcgaaggggagctggccctg
ccggacgttccgccgcatgtgctggccaagtatccgggcatcctggccggtatacagggc
ctggaggagcaggggttcccggtgttagtcaaggacgcatcgctcggcggtgagttcccg
gtgatgtgcgtgacactcatgaacccgcgtaccggcggggtatttgcctcgttcggtgcc
catccaagcttcgaagtggcgcttgagcgtagccttaccgagctgctgcaagggcgcagc
ttcgaggggctgaacgacctgccgcaaccgaccttcgaaagccatgccctcaccgagccg
aacaacttcgtcgagcactttatcgattcgagcggtgtggtgtcgtggcgcttcttcagc
gccaaggccgacttcgagttcgtcgaatgggacttctcaggccacggtgaggactccaat
agccaggaagcggcaaccttgttcggcatcctcgaaggccttggcaaagaggtctacatg
gccgtgtacgacaatctcggcgccactgcctgtcgcatcctggtgccaggctattccgag
atctacccggttgaagacctgatctgggacaacaccaaccgcgctctggattttcgcgcc
gacattctcaacctgcacagcctcgacgaccgagcgctgcgcgccctgcgccgacgcctg
aacaacctcgacgtggatgactacaccactatcaccacgctgattggcgttgaattcgac
gagaatacggtgtggggccagctgaccattctggagctcaaacttctgatctgccttgcg
ctcaagcgcttggaggatgccaaggagctggtcgaggcgttcctgcaattcaatgacaac
actgtcgatcgcgggcttttctaccaggcgctgaacgtggtgttggaggtgtacttggac
gatgagcttgaaatcgccgattacgagaccaacttgcggcgcatgttcggcaatgagcgg
atggatgcagcgctggggtcggtcgaggcaagcgttcgattctacggcctgacgccgacc
agcacgaaactcgaagggctggaccgacatctgcgcctgatcgaaagctacaagaagctg
catgctgcccgggcaaagttcgcctga
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