Pseudomonas promysalinigenes: HU725_012120
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Entry
HU725_012120 CDS
T07662
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HU725_012120
09124 Replication and repair
03420 Nucleotide excision repair
HU725_012120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprg03021
]
HU725_012120
03036 Chromosome and associated proteins [BR:
pprg03036
]
HU725_012120
03400 DNA repair and recombination proteins [BR:
pprg03400
]
HU725_012120
Enzymes [BR:
pprg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HU725_012120
Transcription machinery [BR:
pprg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HU725_012120
Chromosome and associated proteins [BR:
pprg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HU725_012120
DNA repair and recombination proteins [BR:
pprg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HU725_012120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QXI31810
LinkDB
All DBs
Position
complement(2678360..2680621)
Genome browser
AA seq
753 aa
AA seq
DB search
MSYRVAVRALCEFSAKVGDLDLRFTPSPTAQEGMEGHRRVVATRTAGYESEITLAGEYQG
LQVRGRADGYDPVANRLEEIKTYRGDLARQPANHRQLHWAQAKVYAWLLCQARQLASVEV
ALVYLDVDNASQTLISEHYPADALQRFFETQCQRFLAWAQAQQQRLAQRNLGLQALSFPY
PQFRQGQRQLAETLYKAVSTGRCLMAQASTGIGKTLGTLFPLLKAVVPQQLDKVFFLTAK
TPGRALALDALSQISAANPQPALRTLELVARDKACEHPDKACHGDSCPLAQGFYDRLPAA
RQAAASRPMLDRAGLRDVALAHQVCPYYLGQEMARWVDVVVADYNYYFDAHALLFGLTQL
NQWRVAVLVDEAHNLVERGRGMYSATLDQGQLLALRQAKPAGLGSALDRLNRQWNALFKT
QQAPYQASEQLPEQFLRALQQCIGLIQERLNEKPAEVDVQVLQFFYQALQFSRVAELFDE
HFLFDVSLREGPRRRRLASVCLRNVTPARLLAPRMQAARSVTLFSATLSPRRFYTDLLGM
PVDTAWLEVAAPFRAEQLQVHIASHVSTRYRERQASLAPITQLIAEQYQRQPGNYLAFFS
SFEYLQQVASLLAQQHPGIPSWAQAPGMGEAARQAFLDRFVADGQGVGFAVLGGAFGEGI
DLPGTRLIGAFVATLGLPQVNPINEQFKQRLGRQFGAGFDYAYLYPGVRKVIQAAGRVIR
GDDDRGVLVLIDERFAEPLVQQMFPGWWQVAGN
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
gtgagttatcgcgtggcggtgcgggcgttatgtgagttcagcgccaaggtgggcgatctt
gacctgcgcttcaccccttcacccactgctcaagaaggtatggaggggcatcgccgggta
gtggccacgcgaactgcggggtatgagtctgagatcacattggcaggtgagtatcagggt
ttgcaggttcgcgggcgtgccgatggctacgacccggtcgccaatcgccttgaggagatc
aagacctaccgcggtgatctggcacgccagccggccaatcaccgccaactgcattgggcc
caggccaaggtctatgcctggctgctgtgtcaggcgcgacaattggcaagcgtcgaggtg
gcgttggtgtacctggatgtcgacaacgccagccagacgttgatcagcgagcactaccct
gcagatgcgttgcagcgcttcttcgaaacccagtgccaacgctttctggcatgggcgcag
gcccagcagcaacgcctggcccagcgcaacctgggcttgcaggctttgagctttccttac
ccgcagtttcggcaagggcagcgtcaactggctgaaacgttatacaaagcagtcagcacc
gggcgttgcctgatggcccaggccagtaccggcatcggcaagacactgggcaccttgttt
ccactgctcaaggccgtggttccccagcaattggacaaagtgttttttctaaccgccaag
accccaggccgggcgctggcgctcgatgcactgagccagatcagtgcggctaacccgcaa
ccggctttgcgtaccctggagctggtagcacgcgataaggcctgcgaacacccggacaag
gcctgccatggcgactcctgtccgctggctcaaggcttttatgaccgtttgcccgctgcg
cgccaggcggcggcatcgcggcccatgcttgaccgtgccgggctgcgcgacgtggcattg
gcgcaccaggtttgtccatattacctgggccaggaaatggcccgctgggtggacgtggtg
gtcgccgactacaactattacttcgatgcccatgccttgttgttcggcctgactcagctc
aaccagtggcgtgtggccgtgttggtggacgaagcgcacaacctagtcgagcgcgggcgc
ggcatgtacagcgccacccttgatcaaggccagttgcttgcgttgcgccaagccaaacct
gccggcctggggagcgccctggaccggctgaaccgtcagtggaacgcgctgttcaaaacc
cagcaggccccctatcaggccagtgagcagttgcccgagcagtttctgcgtgcactgcag
caatgcatcgggctgattcaggagcgcctcaacgaaaagcccgccgaagtggatgtgcag
gtgttgcagttcttttaccaggcgctgcagttcagccgggtggccgagttattcgatgag
catttcctgttcgacgtcagcctgcgtgaaggcccacgcaggcgtcgcttggccagtgtg
tgcttacgcaatgtaacgccagcgcggctgcttgccccgcgcatgcaagcagcgcgcagt
gtcacgctgttttcggcgactttgagcccgcggcgtttctacaccgacttgctcggcatg
ccggtggataccgcctggctggaggttgcggcaccgtttcgcgccgaacaacttcaagtg
cacattgccagccacgtgtcgacccggtaccgcgagcgccaggcctcactggcgccaatc
actcaactgattgccgagcagtatcaacgtcagccaggcaattacctggcgttcttcagc
agtttcgagtacctgcagcaggtggcaagcctacttgcccagcaacatcccggcatccct
tcctgggctcaggcccccggcatgggcgaagctgcgcgccaggcgttcctcgatcgcttc
gtggcagacgggcagggggttggctttgcggtgctgggtggggcattcggcgagggcatc
gacttgcccggtacgcgactgattggggcattcgtcgcgaccctcggcctgccccaggta
aacccgatcaatgagcagttcaagcagcgtctgggccggcagttcggtgctggtttcgac
tacgcctatttgtatcccggagtgcgcaaggtgatccaggccgccgggcgggtcattcgc
ggggatgacgaccgtggcgtgctggtgttgatcgacgagcgctttgccgagcctttggta
caacagatgtttcctggatggtggcaagtggccggaaactaa
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