Pseudomonas promysalinigenes: HU725_014070
Help
Entry
HU725_014070 CDS
T07662
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pprg
Pseudomonas promysalinigenes
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprg03032
]
HU725_014070
03400 DNA repair and recombination proteins [BR:
pprg03400
]
HU725_014070
Enzymes [BR:
pprg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HU725_014070
DNA replication proteins [BR:
pprg03032
]
Prokaryotic type
DNA Topoisomerases
HU725_014070
DNA repair and recombination proteins [BR:
pprg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HU725_014070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QXI36011
LinkDB
All DBs
Position
3070109..3071131
Genome browser
AA seq
340 aa
AA seq
DB search
MLDCPLPPSLHYVEDSQPGLTRRRWRDRFIYLDADGQRVKDKQTLARIAALVIPPAYTDV
WICSDPQGHLQATGRDARGRKQYRYHPQWRELRDQHKYGRMLAFAQALPKLRAQLEIHLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNKSYGLTTLRNRHVQVQGSTIRFQFRGK
RGVEHNVTMQDRRLANLLKRCMELPGQALFQYLDDDGQRHSIGSSEVNQFLQELTGADFT
AKDYRTWAGSSLALSLLRPLAWEPDSEAKRQIATIVKQVAARLGNTPAVCRRCYIHPAVL
EHYALGRLADLPSRRVRKGLDAEEVALLLFLQALETKTDD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactgccctctgcctccaagcctgcactacgtcgaagacagccagccgggcctc
actcggcgccgctggcgtgatcgcttcatctacctcgatgctgacgggcaacgggtgaag
gacaaacagacccttgcacgcatcgccgcgctagtgatcccaccggcctacaccgacgtc
tggatctgcagcgacccgcaaggccacctgcaagcgaccggccgcgatgcacgcggccgc
aaacagtatcgctaccacccccaatggcgggaactgcgagatcagcacaaatacggtcgg
atgctggcctttgctcaagccctgcccaaactgcgcgcgcagttggaaattcacttagcg
cgccctggcctggatcgtgagaaagtcatggcactggtcgtgagcttgctggaccacacg
ttgatccgcatcggcaaccaacgctacctgcgcgacaacaaatcctacggcctgacaacc
ctgcgcaatcgccatgtccaggtgcaaggcagtacgatccgtttccagtttcgtggcaag
cgaggggtcgagcacaacgtcacgatgcaagacaggcgcctggccaatctgctcaagcgc
tgcatggagctgccagggcaagcgctgtttcagtacctggatgacgatgggcaacggcac
agtattggttcaagcgaggtcaatcagtttttgcaggagctgaccggtgccgacttcacc
gccaaggactatcgaacctgggcgggcagcagcctggcacttagcctgttgcggcctctg
gcctgggagccggacagcgaagccaaacgccagatcgccaccatcgtcaagcaagtggcg
gcaaggctgggcaacacaccggcagtgtgcaggcgctgctatattcaccccgccgtgctt
gagcattacgctttaggacgcctggcagacttgccgagccggcgtgtacgcaaagggctc
gatgcagaagaggtggcactgttgctgtttcttcaggctctggaaaccaaaacggatgat
tga
DBGET
integrated database retrieval system
