Pseudomonas promysalinigenes: HU725_015980
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Entry
HU725_015980 CDS
T07662
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg02020
Two-component system
pprg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU725_015980
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HU725_015980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pprg02022
]
HU725_015980
02035 Bacterial motility proteins [BR:
pprg02035
]
HU725_015980
Two-component system [BR:
pprg02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
HU725_015980
Bacterial motility proteins [BR:
pprg02035
]
Flagellar system
Flagellar assembly proteins
Others
HU725_015980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
MCM
AAA_2
HTH_20
AAA_16
HTH_30
FleQ
HTH_28
MerR
AAA
AAA_3
AAA_19
HTH_24
AAA_22
Mg_chelatase
HTH_23
HTH_11
Sigma70_r4_2
AAA_7
DUF2249
HTH_1
nSTAND3
HTH_5
HTH_17
HTH_Mga
ATPase
Motif
Other DBs
NCBI-ProteinID:
QXI32516
LinkDB
All DBs
Position
complement(3492097..3493473)
Genome browser
AA seq
458 aa
AA seq
DB search
MAIKVLLVEDDRVLRQALGDTLEIGGFAFDAVGSAEQALEAVAGEVYSLVVSDVNMPGMD
GHQLLVQLRRHHPQLPVLLMTAHAAVERAVEAMRQGAVDYLVKPFEPQALLSLVERHAAG
RLTVADDEGPVACEPASLQLLELAARVARSDSTVLICGESGTGKEVLARYIHQQSPRAAQ
PFVAINCAAIPDNMLEATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPLGLQA
KLLRVLQEREVERVGGRKPIALNIRVLATSNRDMASEVAAGRFREDLYYRLSVFPLAWQP
LRERRGDILPLAERLLARHAAKMQHAPVRLSAQARDCLLAHTWPGNVRELDNALQRALIL
QQGGVIEAADFCLAGAIPLSALGQAAAPPLPAEGLVESAGLGDDMRRHEFQKIIDTLRAE
RGRRKEAAEKLGISPRTLRYKLAQMREAGLDVEASLFG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaaggtgctgctggtcgaggatgaccgcgtattgcgccaggccctgggcgat
accctggaaatcggtggcttcgccttcgatgcagtgggcagcgccgagcaggcgctggag
gcggtggccggtgaggtttacagcctagtggtcagtgacgtgaacatgccgggtatggac
ggccatcaattgctggtgcagctgcgccgtcatcatcctcaattaccagtgttgctgatg
accgcccacgccgctgtggagcgggccgtggaggccatgcgccaaggggccgtggattat
ctggtcaagccgttcgagccacaggccttgctgagcctggtcgaacgccacgccgccggg
cgtttgacggtggccgacgatgaggggccggtagcgtgcgaacccgccagcctgcagctg
ttggagctggcagcacgggtagctcgcagcgattcgaccgtgctgatatgtggtgagtca
ggtaccggcaaggaagtgcttgcgcgttacatccatcagcagtcgccacgtgcagcgcag
ccattcgtggcgataaactgcgcggccattccggacaacatgctcgaggccacgctgttt
ggtcacgagaaaggcgccttcaccggggcaatcgcggcccaggctggcaagttcgaacag
gctgaaggcggtaccttgctgctcgacgagatctccgaaatgccccttggcttgcaggcc
aaactattacgtgtactgcaggagcgcgaagtggaacgggtaggggggcgcaagcccatc
gcgctgaatatccgcgttttggctaccagcaaccgggatatggcgagcgaagtggcagca
gggcgttttcgcgaggacctttactaccggctgtcggtgttcccactggcgtggcaaccg
ttgcgcgagcgccgtggcgatattctgccgctggcagagcgcttgctggcgcggcacgct
gcgaagatgcagcatgcgccagtacgcttgtctgcccaggcgcgtgattgcctgctggcg
cacacgtggccgggtaatgtgcgagaactggacaacgcgctgcagagggcgttgattctg
cagcagggcggcgtcattgaggcggcggatttttgtctggcgggcgccattccattgtcg
gcgctgggccaagctgctgcaccgccactgcctgctgaaggacttgtcgagtccgcaggc
ctgggcgacgacatgcgtcgccatgagtttcagaaaatcatcgataccctgcgcgccgag
cgtgggcggcgcaaggaggcagccgaaaaactcggcatcagcccgcgtaccctgcgctac
aagctcgcgcagatgcgtgaagccgggctcgatgtggaggccagcctgttcggctga
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