Pseudomonas promysalinigenes: HU725_016520
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Entry
HU725_016520 CDS
T07662
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HU725_016520 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprg03019
]
HU725_016520 (recQ)
03400 DNA repair and recombination proteins [BR:
pprg03400
]
HU725_016520 (recQ)
Enzymes [BR:
pprg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HU725_016520 (recQ)
Messenger RNA biogenesis [BR:
pprg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HU725_016520 (recQ)
DNA repair and recombination proteins [BR:
pprg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HU725_016520 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Sigma70_r4_2
HTH_40
HTH_23
GerE
HTH_29
ResIII
BTRD1
Motif
Other DBs
NCBI-ProteinID:
QXI32615
LinkDB
All DBs
Position
complement(3638251..3640395)
Genome browser
AA seq
714 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLT
VVVSPLIALMDDQVATLDELGVPAAALNSTLSPEQQRDLAGRLRRGEVKMLYLAPERLVQ
PRMLDFLRGLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRT
REEIVQRLHLQGAERFLSSFDRPNIFYRIVPKEAPRKQLMAFLAERRGNAGIVYCLSRKK
VDETAAFLCDQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPSDAWMAYGLQDMVMLKQMLQNSEGDERHKRVEQHK
LDAMLALCEETRCRRQALLAYFDETLKQPCGHCDNCVDQVQTWDATEPARQALSAVFRTG
QRYGVGHLIDVLLGKDTEKVRNFGHEKLSVFGVGKGLSEAEWRSLFRQLVARGLVDIDLE
GYGGLRLSDRCRPLLRGEVNLQLRRDLKPQIVAKTSSSGGSPASQLVRAEERELWEALRA
LRRKLAEEHSVPPYVIFPDSTLLEMLRSQPTSLSDMAQVSGVGARKLERYGQAFLEVLNG
AGGTAEAPKVVLDLRHELVSLARAGMTPAQIAGQLNCSEKNVYSLLAEALGRQELSLEQA
LDLPQDLMMEVQDAFLDGEGELPPVSAIAPLFGARVPEGVLYCIRAALAAEFEL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcagcgcgttctcaaggatatcttcggttacgacagtttccgtggg
cgccaggcagcgatcatcgaatgcgtggccaatggcggcgatgccttggtactgatgcct
accggtggcggcaagtcgctgtgcttccaggtgccgggcctgctgcgtccgggcctcacg
gtggtggtgtcgccactgatcgcgttgatggatgaccaagtcgccacattggacgaactc
ggcgttcccgctgcagcgctgaattcaaccctgagccctgagcaacagcgtgatctggcc
gggcgtctgcgccggggcgaggtgaagatgctgtacttggcgccagagcgcctggttcag
ccgcggatgctggattttctgcgcgggctggacatctcgctgttcgccatcgacgaagcc
cactgcgtatcgcaatggggccatgacttccgccccgaatatctgcaactggggcaattg
gccgagttgttcccccacgtaccgcgcattgccctgaccgccaccgccgatatgcgcacc
cgtgaagagatcgtccagcgcctgcacctgcagggcgccgagcgtttcctgtcgagcttc
gaccgccccaacatcttctaccgtatcgtgcccaaagaggcgccacgcaagcaactgatg
gccttcctcgccgagcgccgtggcaacgccggtatcgtctactgcctgtcgcgcaagaaa
gtcgatgagaccgcggcgttcctgtgcgatcaaggcttcccggcattgccgtaccacgca
gggcttgccgccgaaacccgagcggccaaccagcatcggttcctcaacgaggaagggctg
atcatggtcgctaccattgcctttgggatgggcatcgacaagcccaacgtgcgtttcgtt
gctcacctcgatttgcccaagtcgctggaggcctactaccaggaaaccgggcgtgccggc
cgtgatgggctgccctccgatgcctggatggcttacggtctgcaggacatggtgatgctc
aagcagatgctgcagaactccgaaggcgacgagcgccataagcgcgtcgagcagcacaag
cttgacgccatgctggccctgtgtgaagaaacccgctgccggcgccaggcgttgctggcc
tacttcgatgaaaccctcaaacagccctgcggccattgcgacaactgcgtagatcaggtc
cagacctgggacgccaccgagcctgctcgccaggcactgtcggcggtgttccgtaccggg
caacgttatggggtgggtcacctgatcgatgtgttgctgggcaaggacactgaaaaggta
cgcaacttcggccacgaaaagctctcggttttcggtgtgggcaagggcttgtccgaggca
gaatggcgttcgctgttccgccaactggtggcgcgcggcttggttgatatcgatcttgaa
ggttatggcggcctgcgcttgtccgaccgctgccggccgctgctgcgtggggaggtgaac
ctgcagctgcgtcgtgacctcaagccacagatcgtggccaaaacttcctccagcggcggc
agcccggccagccagctggtgcgcgccgaggagcgcgagctgtgggaggctttacgcgcc
ctgcggcgcaagttggccgaagaacacagcgtgccgccctatgtcattttccccgattcc
accttgctggaaatgctccgtagccagcctactagcctcagcgacatggctcaggtcagc
ggtgttggggcgcgcaagctggagcgctatggccaagccttccttgaagtgctcaacggc
gcaggcggtactgccgaagcacctaaggttgtgctcgacctgcgccatgaattggtcagc
ctggctcgcgctggtatgacgccagcgcaaatcgccggccagctcaactgcagcgaaaag
aacgtgtacagcctgttggccgaggcccttggccgccaggagctgagccttgagcaggcg
cttgatctgccgcaagatctgatgatggaggtccaggatgctttcctcgatggcgagggc
gaactgccgccggtttcggcaattgcccccttgtttggcgcacgggtgccagagggtgtg
ctgtattgcatacgagcagcattggcggccgagttcgagctctga
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