Pseudomonas promysalinigenes: HU725_016685
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Entry
HU725_016685 CDS
T07662
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pprg
Pseudomonas promysalinigenes
Pathway
pprg00061
Fatty acid biosynthesis
pprg00071
Fatty acid degradation
pprg01100
Metabolic pathways
pprg01212
Fatty acid metabolism
pprg02024
Quorum sensing
pprg04146
Peroxisome
Module
pprg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pprg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HU725_016685 (fadD1)
00071 Fatty acid degradation
HU725_016685 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HU725_016685 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HU725_016685 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pprg01004
]
HU725_016685 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprg04147
]
HU725_016685 (fadD1)
Enzymes [BR:
pprg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HU725_016685 (fadD1)
Lipid biosynthesis proteins [BR:
pprg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HU725_016685 (fadD1)
Exosome [BR:
pprg04147
]
Exosomal proteins
Exosomal proteins of breast milk
HU725_016685 (fadD1)
Exosomal proteins of breast cancer cells
HU725_016685 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
Motif
Other DBs
NCBI-ProteinID:
QXI32647
LinkDB
All DBs
Position
complement(3688383..3690080)
Genome browser
AA seq
565 aa
AA seq
DB search
MIENFWKDKYPAGITAEINPDEFPNIQAVLKQSCQRFANKPAFSNLGKTITYGELYTLSG
AFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYN
LPRAVRFNDALALGNGQPVTEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGANLHEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNDAFRALDFSALKITLSGGMALQLSVAERWKSVTGCAICEGYGM
TETSPVAAVNPSEANQVGTIGIPVPSTLCKIIDDAGNELPLGETGELCVKGPQVMKGYWQ
REDATREILDSDGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAGLPG
VLQCAAIGVPDEKSGEVIKVFIVVKPGMTVTKEQVMEHMRANVTGYKVPRYIEFRDVLPT
TNVGKILRRELRDEELKKQGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaatttttggaaggataaatacccagccgggattacggcggaaatcaatcct
gacgaattccctaatatccaggcggtactcaagcaatcctgccaacgctttgccaataaa
ccggcctttagcaacctgggcaagaccatcacctacggcgaactgtatacgctctcaggc
gctttcgcggcctggctgcagcagcacacagacctcaagccaggtgatcgcattgccgtt
cagctgcccaatgtcctgcaatacccggtagccgtattcggcgcgatgcgcgctggcttg
atcgtggtcaacaccaacccgctctacaccgcacgcgagatggagcatcagttcaacgac
tccggcgccaaggccctggtttgcctggccaatatggcacatctggccgaaaaggtagta
cccaagacccaggtcaagcacgtcatcgtcaccgaagtggctgacttgctcccccccctc
aagcgcctgctgatcaacagcgtgatcaagtacgtgaagaaaatggtgccggcctataac
ctgccgcgcgccgtgcgcttcaacgatgctttggcgctgggcaatggccagccggtcacc
gaagctaacccgcaagccaatgacgtggccgtgctgcagtacaccggcggtaccactggc
gtggcaaaaggggcgatgctgacccaccgcaacctggtggcaaacatgctgcagtgtcgt
gcgctgatgggcgctaacctgcatgaaggttgcgagatcctcatcacaccgttgccgctg
taccacatctacgctttcaccttccactgcatggcgatgatgctgatcggcaaccacaac
gtgctgatcagtaacccacgtgacctacctgccatggtcaaggagctgagcaaatggaag
ttcagcggtttcgttggcctgaacacgctgttcgttgcgttgtgcaataacgatgcattt
cgtgccttggacttctcggcactgaaaatcaccttgtccggtggcatggcattgcagttg
agcgtcgccgaacgctggaagagcgtgaccggctgtgccatctgcgaaggctacggcatg
accgaaaccagcccggtggcggcggtgaatccgtccgaagctaaccaggtgggtaccatc
ggcatcccagtgccctcgaccctgtgcaagatcatcgacgatgccggcaacgaattgcca
ctgggcgaaaccggcgagctgtgcgtcaagggcccgcaggtcatgaagggctactggcag
cgcgaggatgccacccgtgagatcctcgacagtgacggttggctcaagactggcgatatc
gccttgatccagcccgatggctatatgcgtatcgtcgatcgcaagaaagacatgatcctg
gtctcaggcttcaacgtgtaccccaacgagctcgaagatgtgctcgctggcttgccgggc
gtgctgcagtgcgctgccatcggtgtgccggacgagaagtcgggtgaggtaatcaaggta
ttcatcgtggtcaagcctggcatgacggtcaccaaggagcaggtgatggaacacatgcgc
gccaacgtcaccggatacaaggtgccgcgctacatcgagttccgcgatgtattgccgacc
accaacgtcggcaagatcctgcgccgtgaactacgcgatgaagaactgaaaaagcagggc
ttgaagaagatcgcctga
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